RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 SPASTQ9UBP0 616 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 MAN2B2Q9Y2E5 1009 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 LOXL2Q9Y4K0 774 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 UNC13CQ8NB66 2214 aa13.02□□□□□ -0.33
PRKCSH-210ENST00000589990 CENPEQ02224 2701 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 TRIM49BA6NDI0 452 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 PAGE1O75459 146 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 RPLP0P05388 317 aaKnown RBP13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 MYL1P05976 194 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 ANXA6P08133 673 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 ZSCAN22P10073 491 aaPredicted RBP13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 CCR1P32246 355 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 IGFALSP35858 605 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 INHBCP55103 352 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 OXCT1P55809 520 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 LRRC73Q5JTD7 316 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 ARTNQ5T4W7 220 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 OTUD1Q5VV17 481 aaPredicted RBP13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 KCTD16Q68DU8 428 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 TMPRSS9Q7Z410 1059 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 ZNF683Q8IZ20 524 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 OR7D4Q8NG98 312 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 PCDH19Q8TAB3 1148 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 LMO3Q8TAP4 145 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 FAM174AQ8TBP5 190 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 FEM1CQ96JP0 617 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 KREMEN1Q96MU8 473 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 NT5C1BQ96P26 610 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 GFM1Q96RP9 751 aaKnown RBP13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 CPEB1Q9BZB8 566 aaKnown RBP13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 SIK2Q9H0K1 926 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 TMPRSS4Q9NRS4 437 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 FARP1Q9Y4F1 1045 aaPredicted RBP13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 SDK2Q58EX2 2172 aa13.01□□□□□ -0.33
PRKCSH-210ENST00000589990 ICE1Q9Y2F5 2266 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 LRP4O75096 1905 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 C9orf172C9J069 976 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 NVLO15381 856 aaKnown RBP13□□□□□ -0.33
PRKCSH-210ENST00000589990 SART1O43290 800 aaKnown RBP13□□□□□ -0.33
PRKCSH-210ENST00000589990 CLDN11O75508 207 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 RHOCP08134 193 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 JMJD7P0C870 316 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 TFE3P19532 575 aaPredicted RBP13□□□□□ -0.33
PRKCSH-210ENST00000589990 ITIH2P19823 946 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 CMA1P23946 247 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 ITGB7P26010 798 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 L1CAMP32004 1257 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 RPIAP49247 311 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 FMO5P49326 533 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 FOXK1P85037 733 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 NME3Q13232 169 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 STILQ15468 1287 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 C5orf22Q49AR2 442 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 ANKRD40Q6AI12 368 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 TFAP2DQ7Z6R9 452 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 TMEM110Q86TL2 294 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 VPS36Q86VN1 386 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 DTX1Q86Y01 620 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 OR6K2Q8NGY2 324 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 WDR48Q8TAF3 677 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 ZNF564Q8TBZ8 553 aaPredicted RBP13□□□□□ -0.33
PRKCSH-210ENST00000589990 USP7Q93009 1102 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 PMEPA1Q969W9 287 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 CENPTQ96BT3 561 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 CCDC114Q96M63 670 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 LENG8Q96PV6 779 aaPredicted RBP13□□□□□ -0.33
PRKCSH-210ENST00000589990 PSMG3-AS1Q96PY0 264 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 SLC2A13Q96QE2 648 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 MBNL1Q9NR56 388 aaKnown RBP13□□□□□ -0.33
PRKCSH-210ENST00000589990 MPP6Q9NZW5 540 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 SLC12A6Q9UHW9 1150 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 FCF1Q9Y324 198 aaKnown RBP13□□□□□ -0.33
PRKCSH-210ENST00000589990 LRRK1Q38SD2 2015 aa13□□□□□ -0.33
PRKCSH-210ENST00000589990 SLC16A3O15427 465 aaKnown RBP12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 ADCY5O95622 1261 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 CCKBRP32239 447 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 PRCPP42785 496 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 SYKP43405 635 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 DNA2P51530 1060 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 CCNHP51946 323 aaPredicted RBP12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 THOP1P52888 689 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 MAPK10P53779 464 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 CDH4P55283 916 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 KRT83P78385 493 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 CDK17Q00537 523 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 CCDC15Q0P6D6 951 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 SGCGQ13326 291 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 EIF3IQ13347 325 aaKnown RBP12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 C4orf17Q53FE4 359 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 FAXCQ5TGI0 409 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 ESRP1Q6NXG1 681 aaKnown RBP12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 ARL10Q8N8L6 244 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 Q8N9G6 341 aaPredicted RBP12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 DCAF4L2Q8NA75 395 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 BTN2A2Q8WVV5 523 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 GLMNQ92990 594 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 TSACCQ96A04 125 aaPredicted RBP12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 PPP1R16AQ96I34 528 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 PPP1R9BQ96SB3 815 aa12.99□□□□□ -0.33
PRKCSH-210ENST00000589990 C2orf49Q9BVC5 232 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms