RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 PCDHB1Q9Y5F3 818 aa16.57■□□□□ 0.24
MBD3-206ENST00000589901 ASXL3Q9C0F0 2248 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 LY6G6EA0A0G2JKS1 128 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 IGLON5A6NGN9 336 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 C2CD4BA6NLJ0 364 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 SCAMP1O15126 338 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 AP1G1O43747 822 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 LRIG2O94898 1065 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 RHOQP17081 205 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 ABL2P42684 1182 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 NRG1Q02297 640 aaPredicted RBP16.56■□□□□ 0.24
MBD3-206ENST00000589901 ARL13BQ3SXY8 428 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 TPRG1LQ5T0D9 272 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 KYAT3Q6YP21 454 aaKnown RBP16.56■□□□□ 0.24
MBD3-206ENST00000589901 LRRC69Q6ZNQ3 347 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 CCDC185Q8N715 623 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 FAM174AQ8TBP5 190 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 ISG20Q96AZ6 181 aaKnown RBP16.56■□□□□ 0.24
MBD3-206ENST00000589901 KLF6Q99612 283 aaPredicted RBP16.56■□□□□ 0.24
MBD3-206ENST00000589901 OSBPL2Q9H1P3 480 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 NLRC4Q9NPP4 1024 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 TMEM248Q9NWD8 314 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 NLGN3Q9NZ94 848 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 KLF15Q9UIH9 416 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 RAI2Q9Y5P3 530 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 U3KQA8 63 aa16.56■□□□□ 0.24
MBD3-206ENST00000589901 SPTY2D1-AS1A0A0U1RR47 76 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 C16orf96A6NNT2 1141 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 K7ESM1 405 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 KRIT1O00522 736 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 RRP8O43159 456 aaKnown RBP16.55■□□□□ 0.24
MBD3-206ENST00000589901 OPA1O60313 960 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 PLEKP08567 350 aaPredicted RBP16.55■□□□□ 0.24
MBD3-206ENST00000589901 ALPPL2P10696 532 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 SOX5P35711 763 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 ETFBP38117 255 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 PTPN9P43378 593 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 MAPKAPK2P49137 400 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 HDAC4P56524 1084 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 JAM2P57087 298 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 HNRNPKP61978 463 aaKnown RBP eCLIP16.55■□□□□ 0.24
MBD3-206ENST00000589901 PTP4A2Q12974 167 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 SGCGQ13326 291 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 KRT31Q15323 416 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 DCP2Q8IU60 420 aaKnown RBP16.55■□□□□ 0.24
MBD3-206ENST00000589901 PLPP6Q8IY26 295 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 ZNF548Q8NEK5 533 aaPredicted RBP16.55■□□□□ 0.24
MBD3-206ENST00000589901 SNIP1Q8TAD8 396 aaKnown RBP16.55■□□□□ 0.24
MBD3-206ENST00000589901 ENOX1Q8TC92 643 aaKnown RBP16.55■□□□□ 0.24
MBD3-206ENST00000589901 FAM172AQ8WUF8 416 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 FGF11Q92914 225 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 PCDHB18PQ96TA0 734 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 C1QTNF2Q9BXJ5 285 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 MAGEH1Q9H213 219 aa16.55■□□□□ 0.24
MBD3-206ENST00000589901 CXorf51AA0A1B0GTR3 108 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 NEMP2A6NFY4 417 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 NEMP1O14524 444 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 FPGTO14772 594 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 SPINT1O43278 529 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 TSPAN6O43657 245 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 RAMP2O60895 175 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 CSF2P04141 144 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 UGT2B4P06133 528 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 UNGP13051 313 aaPredicted RBP16.54■□□□□ 0.24
MBD3-206ENST00000589901 NME1P15531 152 aaKnown RBP16.54■□□□□ 0.24
MBD3-206ENST00000589901 RFC1P35251 1148 aaPredicted RBP16.54■□□□□ 0.24
MBD3-206ENST00000589901 RABIFP47224 123 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 PDE1CQ14123 709 aaPredicted RBP16.54■□□□□ 0.24
MBD3-206ENST00000589901 POLD3Q15054 466 aaPredicted RBP16.54■□□□□ 0.24
MBD3-206ENST00000589901 ZNF805Q5CZA5 627 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 CT47A1Q5JQC4 288 aaPredicted RBP16.54■□□□□ 0.24
MBD3-206ENST00000589901 ATXN7L2Q5T6C5 722 aaPredicted RBP16.54■□□□□ 0.24
MBD3-206ENST00000589901 CDKAL1Q5VV42 579 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 CDCP2Q5VXM1 449 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 STRADAQ7RTN6 431 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 PARGQ86W56 976 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 FAM181AQ8N9Y4 354 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 NETO2Q8NC67 525 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 OR2AP1Q8NGE2 309 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 BAP1Q92560 729 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 CENPIQ92674 756 aaPredicted RBP16.54■□□□□ 0.24
MBD3-206ENST00000589901 TBC1D31Q96DN5 1066 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 KLHL32Q96NJ5 620 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 LENG8Q96PV6 779 aaPredicted RBP16.54■□□□□ 0.24
MBD3-206ENST00000589901 PRORYQ9H606 182 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 IPO11Q9UI26 975 aaKnown RBP16.54■□□□□ 0.24
MBD3-206ENST00000589901 HPCAL4Q9UM19 191 aa16.54■□□□□ 0.24
MBD3-206ENST00000589901 EIF4E1BA6NMX2 242 aaKnown RBP16.53■□□□□ 0.24
MBD3-206ENST00000589901 GSRP00390 522 aa16.53■□□□□ 0.24
MBD3-206ENST00000589901 MPOP05164 745 aa16.53■□□□□ 0.24
MBD3-206ENST00000589901 KRT3P12035 628 aa16.53■□□□□ 0.24
MBD3-206ENST00000589901 GEMIN4P57678 1058 aaKnown RBP16.53■□□□□ 0.24
MBD3-206ENST00000589901 SNRPD1P62314 119 aaKnown RBP16.53■□□□□ 0.24
MBD3-206ENST00000589901 CCDC173Q0VFZ6 552 aa16.53■□□□□ 0.24
MBD3-206ENST00000589901 MYLK3Q32MK0 819 aa16.53■□□□□ 0.24
MBD3-206ENST00000589901 TBC1D25Q3MII6 688 aa16.53■□□□□ 0.24
MBD3-206ENST00000589901 LRRC73Q5JTD7 316 aa16.53■□□□□ 0.24
MBD3-206ENST00000589901 CLEC17AQ6ZS10 378 aa16.53■□□□□ 0.24
MBD3-206ENST00000589901 PYROXD2Q8N2H3 581 aa16.53■□□□□ 0.24
MBD3-206ENST00000589901 RAB7BQ96AH8 199 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms