RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 KLC1Q07866 573 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 ITGA9Q13797 1035 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 C4orf17Q53FE4 359 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 ACSBG2Q5FVE4 666 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 FAM171BQ6P995 826 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 RFWD3Q6PCD5 774 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 CES3Q6UWW8 571 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 ZNF438Q7Z4V0 828 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 SPATA2LQ8IUW3 424 aaPredicted RBP7.51□□□□□ -1.21
ZNF540-206ENST00000589117 ULK2Q8IYT8 1036 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 GSTCDQ8NEC7 633 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 PPHLN1Q8NEY8 458 aaKnown RBP7.51□□□□□ -1.21
ZNF540-206ENST00000589117 ZMIZ2Q8NF64 920 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 MYLPFQ96A32 169 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 LENG1Q96BZ8 264 aaPredicted RBP7.51□□□□□ -1.21
ZNF540-206ENST00000589117 FRMD6Q96NE9 622 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 ZNF570Q96NI8 536 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 FCRL3Q96P31 734 aaPredicted RBP7.51□□□□□ -1.21
ZNF540-206ENST00000589117 KIFC1Q9BW19 673 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 FSD1LQ9BXM9 530 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 C20orf27Q9GZN8 174 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 SENP6Q9GZR1 1112 aaPredicted RBP7.51□□□□□ -1.21
ZNF540-206ENST00000589117 VCX3BQ9H321 246 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 ZFYVE28Q9HCC9 887 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 GPAMQ9HCL2 828 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 FNIP2Q9P278 1114 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 BCAP29Q9UHQ4 241 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 HHLA1C9JL84 531 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 TGFBR3LH3BV60 316 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 DFFAO00273 331 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 MATN3O15232 486 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 CABYRO75952 493 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 DDHD2O94830 711 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 C2P06681 752 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 CPA2P48052 419 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 SLC12A2P55011 1212 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 HUNKP57058 714 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 ACTR3P61158 418 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 GRIK3Q13003 919 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 SLC12A1Q13621 1099 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 GRM2Q14416 872 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 USP10Q14694 798 aaKnown RBP7.51□□□□□ -1.21
ZNF540-206ENST00000589117 CCL14Q16627 93 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 TIGD5Q53EQ6 642 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 PPM1JQ5JR12 505 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 CERCAMQ5T4B2 595 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 MAP3K21Q5TCX8 1036 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 OVOS1Q6IE37 1185 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 TMEM214Q6NUQ4 689 aaKnown RBP7.51□□□□□ -1.21
ZNF540-206ENST00000589117 AAGABQ6PD74 315 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 LRRC74BQ6ZQY2 392 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 RNF169Q8NCN4 708 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 MIEF2Q96C03 454 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 MFSD3Q96ES6 412 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 VPS39Q96JC1 886 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 FCRL5Q96RD9 977 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 SIK2Q9H0K1 926 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 RHOJQ9H4E5 214 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 CHRAC1Q9NRG0 131 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 IARS2Q9NSE4 1012 aaKnown RBP7.51□□□□□ -1.21
ZNF540-206ENST00000589117 SLC39A10Q9ULF5 831 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 LRCH1Q9Y2L9 728 aa7.51□□□□□ -1.21
ZNF540-206ENST00000589117 PDCD11Q14690 1871 aaKnown RBP7.51□□□□□ -1.21
ZNF540-206ENST00000589117 A0A0U1RQF3 1178 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 ITM2AO43736 263 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 CRABP2P29373 138 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 CD68P34810 354 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 GRIK1P39086 918 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 ZNF157P51786 506 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 TUSC3Q13454 348 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 BLMHQ13867 455 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 PPP2R5DQ14738 602 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 PKN3Q6P5Z2 889 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 AGMOQ6ZNB7 445 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 ACAD11Q709F0 780 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 GPRIN1Q7Z2K8 1008 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 SERINC5Q86VE9 423 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 KIRREL3Q8IZU9 778 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 ARHGAP18Q8N392 663 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 AFAP1L2Q8N4X5 818 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 NPWQ8N729 165 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 NETO2Q8NC67 525 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 TTC16Q8NEE8 873 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 CALML6Q8TD86 181 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 DQX1Q8TE96 717 aaKnown RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 JADE3Q92613 823 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 ATXN7L3BQ96GX2 97 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 SCYL1Q96KG9 808 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 AGAP2Q99490 1192 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 GPR22Q99680 433 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 TBL1YQ9BQ87 522 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 EBF4Q9BQW3 602 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 SPON2Q9BUD6 331 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 CDH19Q9H159 772 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 TASP1Q9H6P5 420 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 ARHGEF38Q9NXL2 777 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 NDE1Q9NXR1 346 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 KLHL42Q9P2K6 505 aa7.5□□□□□ -1.21
ZNF540-206ENST00000589117 IPO11Q9UI26 975 aaKnown RBP7.5□□□□□ -1.21
ZNF540-206ENST00000589117 ARHGAP26Q9UNA1 814 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms