RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 DBX2Q6ZNG2 339 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 BHLHA9Q7RTU4 235 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 METTL3Q86U44 580 aaKnown RBP8.02□□□□□ -1.13
VMP1-204ENST00000587259 MAP7D3Q8IWC1 876 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 MREGQ8N565 214 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 AENQ8WTP8 325 aaKnown RBP8.02□□□□□ -1.13
VMP1-204ENST00000587259 TEKT4Q8WW24 435 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 KCTD13Q8WZ19 329 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 EDEM1Q92611 657 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 MAGOHBQ96A72 148 aaKnown RBP8.02□□□□□ -1.13
VMP1-204ENST00000587259 MYEOVQ96EZ4 313 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 RUFY1Q96T51 708 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 ORAI3Q9BRQ5 295 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 AP1M1Q9BXS5 423 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 DUSP16Q9BY84 665 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 OSBPL8Q9BZF1 889 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 UBXN6Q9BZV1 441 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 ZDHHC5Q9C0B5 715 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 DDX47Q9H0S4 455 aaKnown RBP8.02□□□□□ -1.13
VMP1-204ENST00000587259 EBF2Q9HAK2 575 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 EPB41L5Q9HCM4 733 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 PNPLA8Q9NP80 782 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 MED4Q9NPJ6 270 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 ABCB8Q9NUT2 735 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 RRN3Q9NYV6 651 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 MARCH2Q9P0N8 246 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 MTRF1LQ9UGC7 380 aaKnown RBP8.02□□□□□ -1.13
VMP1-204ENST00000587259 AMACRQ9UHK6 382 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 STAP1Q9ULZ2 295 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.02□□□□□ -1.13
VMP1-204ENST00000587259 RAI2Q9Y5P3 530 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 C2CD4BA6NLJ0 364 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 MAP2K7O14733 419 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 FLRT2O43155 660 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 TLX3O43711 291 aaPredicted RBP8.01□□□□□ -1.13
VMP1-204ENST00000587259 PRPSAP2O60256 369 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 LRCH4O75427 683 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 SEMA4FO95754 770 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 IGLV3-19P01714 112 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 WNT1P04628 370 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 RALAP11233 206 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 OXTRP30559 389 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 CD70P32970 193 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 RFC1P35251 1148 aaPredicted RBP8.01□□□□□ -1.13
VMP1-204ENST00000587259 EIF2S3P41091 472 aaKnown RBP8.01□□□□□ -1.13
VMP1-204ENST00000587259 MARCKSL1P49006 195 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 AFF3P51826 1226 aaKnown RBP8.01□□□□□ -1.13
VMP1-204ENST00000587259 AIF1P55008 147 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 YWHAGP61981 247 aaKnown RBP eCLIP8.01□□□□□ -1.13
VMP1-204ENST00000587259 RPS14P62263 151 aaKnown RBP8.01□□□□□ -1.13
VMP1-204ENST00000587259 SEMG2Q02383 582 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 PDE4CQ08493 712 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 CALCOCO2Q13137 446 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 TFDP2Q14188 446 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 HLTFQ14527 1009 aaKnown RBP eCLIP8.01□□□□□ -1.13
VMP1-204ENST00000587259 PDK2Q15119 407 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 CCNG2Q16589 344 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 PTPRNQ16849 979 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 BOLA3Q53S33 107 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 ALS2CLQ60I27 953 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 KLHDC10Q6PID8 442 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 OLFML1Q6UWY5 402 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 FAM183BPQ6ZVS7 135 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 CHST9Q7L1S5 443 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 STRADAQ7RTN6 431 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 ADIPOR2Q86V24 386 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 PIGZQ86VD9 579 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 PSTKQ8IV42 348 aaKnown RBP8.01□□□□□ -1.13
VMP1-204ENST00000587259 SIX6OS1Q8N1H7 587 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 CCDC89Q8N998 374 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 OR2T3Q8NH03 318 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 UBA3Q8TBC4 463 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 UCMAQ8WVF2 138 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 SLC6A18Q96N87 628 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 ERP44Q9BS26 406 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 FUT8Q9BYC5 575 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 ULBP1Q9BZM6 244 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 TMEM245Q9H330 911 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 LRRC4Q9HBW1 653 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 PRSS16Q9NQE7 514 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 CNGB3Q9NQW8 809 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 SMARCAL1Q9NZC9 954 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 KIAA1522Q9P206 1035 aaPredicted RBP8.01□□□□□ -1.13
VMP1-204ENST00000587259 DMGDHQ9UI17 866 aaKnown RBP8.01□□□□□ -1.13
VMP1-204ENST00000587259 CYTH4Q9UIA0 394 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 USP3Q9Y6I4 520 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 FLNBO75369 2602 aaKnown RBP8.01□□□□□ -1.13
VMP1-204ENST00000587259 HELZ2Q9BYK8 2649 aaKnown RBP8.01□□□□□ -1.13
VMP1-204ENST00000587259 MUC22E2RYF6 1773 aaPredicted RBP8.01□□□□□ -1.13
VMP1-204ENST00000587259 CKAP5Q14008 2032 aa8.01□□□□□ -1.13
VMP1-204ENST00000587259 LRRD1A4D1F6 860 aa8□□□□□ -1.13
VMP1-204ENST00000587259 EIF4E1BA6NMX2 242 aaKnown RBP8□□□□□ -1.13
VMP1-204ENST00000587259 CYSRT1A8MQ03 144 aa8□□□□□ -1.13
VMP1-204ENST00000587259 PYCARD-AS1I3L0S3 204 aa8□□□□□ -1.13
VMP1-204ENST00000587259 TNFSF14O43557 240 aa8□□□□□ -1.13
VMP1-204ENST00000587259 DAB1O75553 588 aa8□□□□□ -1.13
VMP1-204ENST00000587259 CYBBP04839 570 aa8□□□□□ -1.13
VMP1-204ENST00000587259 IGHV4-34P06331 123 aa8□□□□□ -1.13
VMP1-204ENST00000587259 ZNF883P0CG24 379 aa8□□□□□ -1.13
VMP1-204ENST00000587259 PDGFRAP16234 1089 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms