RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 IARS2Q9NSE4 1012 aaKnown RBP11.42□□□□□ -0.58
LIG3-204ENST00000585740 SPG21Q9NZD8 308 aa11.42□□□□□ -0.58
LIG3-204ENST00000585740 SSX2IPQ9Y2D8 614 aa11.42□□□□□ -0.58
LIG3-204ENST00000585740 ATP11BQ9Y2G3 1177 aa11.42□□□□□ -0.58
LIG3-204ENST00000585740 COL4A6Q14031 1691 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 ADAM12O43184 909 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 PLIN3O60664 434 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 PRAMEF11O60813 436 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 H2AFYO75367 372 aaKnown RBP11.41□□□□□ -0.58
LIG3-204ENST00000585740 CLDN11O75508 207 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 COL6A2P12110 1019 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 GRK2P25098 689 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 ELF1P32519 619 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 PPM1AP35813 382 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 ETFBP38117 255 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 SERPINH1P50454 418 aaKnown RBP11.41□□□□□ -0.58
LIG3-204ENST00000585740 RASSF2P50749 326 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 PRKAA2P54646 552 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 ITKQ08881 620 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 STX3Q13277 289 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 ZNF235Q14590 738 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 RFTN1Q14699 578 aaPredicted RBP11.41□□□□□ -0.58
LIG3-204ENST00000585740 LBRQ14739 615 aaKnown RBP11.41□□□□□ -0.58
LIG3-204ENST00000585740 CHI3L2Q15782 390 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 FASTKD1Q53R41 847 aaKnown RBP11.41□□□□□ -0.58
LIG3-204ENST00000585740 TAF1BQ53T94 588 aaPredicted RBP11.41□□□□□ -0.58
LIG3-204ENST00000585740 NADSYN1Q6IA69 706 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 FAM109BQ6ICB4 259 aaPredicted RBP11.41□□□□□ -0.58
LIG3-204ENST00000585740 KIAA0408Q6ZU52 694 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 DDX53Q86TM3 631 aaKnown RBP11.41□□□□□ -0.58
LIG3-204ENST00000585740 LMNTD2Q8IXW0 634 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 FITM2Q8N6M3 262 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 PTPRN2Q92932 1015 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 PABPC5Q96DU9 382 aaKnown RBP11.41□□□□□ -0.58
LIG3-204ENST00000585740 GPR22Q99680 433 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 VN1R3Q9BXE9 311 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 POLR1EQ9GZS1 481 aaKnown RBP11.41□□□□□ -0.58
LIG3-204ENST00000585740 C12orf65Q9H3J6 166 aaKnown RBP11.41□□□□□ -0.58
LIG3-204ENST00000585740 ECT2Q9H8V3 914 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 CYP4F11Q9HBI6 524 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 ALG13Q9NP73 1137 aaKnown RBP11.41□□□□□ -0.58
LIG3-204ENST00000585740 NPHS2Q9NP85 383 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 SAR1AQ9NR31 198 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 THAP1Q9NVV9 213 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 YIPF1Q9Y548 306 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 PSAT1Q9Y617 370 aa11.41□□□□□ -0.58
LIG3-204ENST00000585740 J3KR12 359 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 SNNO75324 88 aaPredicted RBP11.4□□□□□ -0.58
LIG3-204ENST00000585740 BAIAP3O94812 1187 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 SEC24AO95486 1093 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 EPOP01588 193 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 PROCP04070 461 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 HMGA1P17096 107 aaKnown RBP11.4□□□□□ -0.58
LIG3-204ENST00000585740 RPL17P18621 184 aaKnown RBP11.4□□□□□ -0.58
LIG3-204ENST00000585740 HLA-DPA1P20036 260 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 CES1P23141 567 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 CD86P42081 329 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 KPNA2P52292 529 aaKnown RBP11.4□□□□□ -0.58
LIG3-204ENST00000585740 EPHB3P54753 998 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 NCALDP61601 193 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 OCRLQ01968 901 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 BST1Q10588 318 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 POU6F1Q14863 301 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 SPRED3Q2MJR0 410 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 FSTL4Q6MZW2 842 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 GALNT7Q86SF2 657 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 ITIH5Q86UX2 942 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 HERC6Q8IVU3 1022 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 RDH11Q8TC12 318 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 PEX13Q92968 403 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 PSMG2Q969U7 264 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 TADA1Q96BN2 335 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 VPS39Q96JC1 886 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 FEM1CQ96JP0 617 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 MCMBPQ9BTE3 642 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 MYLK2Q9H1R3 596 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 STN1Q9H668 368 aaKnown RBP11.4□□□□□ -0.58
LIG3-204ENST00000585740 RC3H2Q9HBD1 1191 aaKnown RBP11.4□□□□□ -0.58
LIG3-204ENST00000585740 TREX1Q9NSU2 369 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 KCNK4Q9NYG8 393 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 SLC17A6Q9P2U8 582 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 SEPT3Q9UH03 358 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 ZFP69BQ9UJL9 534 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 TLK1Q9UKI8 766 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 CHKBQ9Y259 395 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 LAMA2P24043 3122 aaKnown RBP11.4□□□□□ -0.58
LIG3-204ENST00000585740 DNAH12Q6ZR08 3092 aa11.4□□□□□ -0.58
LIG3-204ENST00000585740 PLXNA4Q9HCM2 1894 aa11.4□□□□□ -0.59
LIG3-204ENST00000585740 KIAA1671Q9BY89 1806 aa11.39□□□□□ -0.59
LIG3-204ENST00000585740 A0A096LPK6 155 aa11.39□□□□□ -0.59
LIG3-204ENST00000585740 LOC285095A0A1B0GVY8 99 aa11.39□□□□□ -0.59
LIG3-204ENST00000585740 ILVBLA1L0T0 632 aa11.39□□□□□ -0.59
LIG3-204ENST00000585740 COCHO43405 550 aa11.39□□□□□ -0.59
LIG3-204ENST00000585740 DNAJC6O75061 913 aa11.39□□□□□ -0.59
LIG3-204ENST00000585740 RASSF9O75901 435 aa11.39□□□□□ -0.59
LIG3-204ENST00000585740 TIMP1P01033 207 aa11.39□□□□□ -0.59
LIG3-204ENST00000585740 SERPINE1P05121 402 aa11.39□□□□□ -0.59
LIG3-204ENST00000585740 FGF1P05230 155 aa11.39□□□□□ -0.59
LIG3-204ENST00000585740 CRABP2P29373 138 aa11.39□□□□□ -0.59
LIG3-204ENST00000585740 KCNQ1P51787 676 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms