RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 IGSF5Q9NSI5 407 aa11.76□□□□□ -0.53
NUP85-224ENST00000583948 KLF15Q9UIH9 416 aa11.76□□□□□ -0.53
NUP85-224ENST00000583948 NOCTQ9UK39 431 aaKnown RBP11.76□□□□□ -0.53
NUP85-224ENST00000583948 ERVW-1Q9UQF0 538 aa11.76□□□□□ -0.53
NUP85-224ENST00000583948 CSMD1Q96PZ7 3565 aa11.76□□□□□ -0.53
NUP85-224ENST00000583948 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.75□□□□□ -0.53
NUP85-224ENST00000583948 MACROD2A1Z1Q3 448 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 MUSKO15146 869 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 THAP12O43422 761 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 RNASEH1O60930 286 aaKnown RBP11.75□□□□□ -0.53
NUP85-224ENST00000583948 GJB6O95452 261 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 MMEP08473 750 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 CHRNB2P17787 502 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 POU3F2P20265 443 aaPredicted RBP11.75□□□□□ -0.53
NUP85-224ENST00000583948 MZF1P28698 734 aaPredicted RBP11.75□□□□□ -0.53
NUP85-224ENST00000583948 GNA15P30679 374 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 TAS2R38P59533 333 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 CDR2Q01850 454 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 CNTN1Q12860 1018 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 ZNF177Q13360 481 aaPredicted RBP11.75□□□□□ -0.53
NUP85-224ENST00000583948 TCEA2Q15560 299 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 ZNF569Q5MCW4 686 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 TPRG1LQ5T0D9 272 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 NADSYN1Q6IA69 706 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 CLEC14AQ86T13 490 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 DNAAF5Q86Y56 855 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 UBR7Q8N806 425 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 SLC30A5Q8TAD4 765 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 TTC17Q96AE7 1141 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 SYT11Q9BT88 431 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 PACSIN1Q9BY11 444 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 IRX2Q9BZI1 471 aaPredicted RBP11.75□□□□□ -0.53
NUP85-224ENST00000583948 FOXP3Q9BZS1 431 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 LACRTQ9GZZ8 138 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 SLC25A18Q9H1K4 315 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 VRTNQ9H8Y1 702 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 FBRSQ9HAH7 460 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 DNAJC28Q9NX36 388 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 CLIC5Q9NZA1 410 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 SEPT3Q9UH03 358 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 DNAI1Q9UI46 699 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 FZD4Q9ULV1 537 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 PCDHGA4Q9Y5G9 962 aa11.75□□□□□ -0.53
NUP85-224ENST00000583948 PIK3R2O00459 728 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 H2AFZP0C0S5 128 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 ITIH1P19827 911 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 CCR10P46092 362 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 NAP1L1P55209 391 aaKnown RBP11.74□□□□□ -0.53
NUP85-224ENST00000583948 ST8SIA6P61647 398 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 ETF1P62495 437 aaKnown RBP11.74□□□□□ -0.53
NUP85-224ENST00000583948 FMO1Q01740 532 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 FAM133BQ5BKY9 247 aaKnown RBP11.74□□□□□ -0.53
NUP85-224ENST00000583948 PITRM1Q5JRX3 1037 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 PIK3R6Q5UE93 754 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 IGF2-ASQ6U949 168 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 ZNF662Q6ZS27 426 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 H2AFVQ71UI9 128 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 MFN1Q8IWA4 741 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 PLD4Q96BZ4 506 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 DUSP16Q9BY84 665 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 ULBP1Q9BZM6 244 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 TCEAL2Q9H3H9 227 aaPredicted RBP11.74□□□□□ -0.53
NUP85-224ENST00000583948 CYP3A43Q9HB55 503 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 LRRC4CQ9HCJ2 640 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 EPB41L5Q9HCM4 733 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 ZNF71Q9NQZ8 489 aaPredicted RBP11.74□□□□□ -0.53
NUP85-224ENST00000583948 KLHL11Q9NVR0 708 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 STRIP2Q9ULQ0 834 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 NENFQ9UMX5 172 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 SCML1Q9UN30 329 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 PCDHGA8Q9Y5G5 932 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 DUSP10Q9Y6W6 482 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 SCN8AQ9UQD0 1980 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 LRRK1Q38SD2 2015 aa11.74□□□□□ -0.53
NUP85-224ENST00000583948 A1L4Q6 167 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 PJA2O43164 708 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 RNGTTO60942 597 aaKnown RBP11.73□□□□□ -0.53
NUP85-224ENST00000583948 PPFIA2O75334 1257 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 MOCS3O95396 460 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 TUBB4AP04350 444 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 CD19P15391 556 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 BRD2P25440 801 aaKnown RBP11.73□□□□□ -0.53
NUP85-224ENST00000583948 CASQ1P31415 396 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 ETV5P41161 510 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 HARS2P49590 506 aaKnown RBP11.73□□□□□ -0.53
NUP85-224ENST00000583948 C1orf61Q13536 156 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 ADGRF1Q5T601 910 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 AGBL4Q5VU57 503 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 ZNF787Q6DD87 383 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 GCNT7Q6ZNI0 430 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 RBM44Q6ZP01 1051 aaKnown RBP11.73□□□□□ -0.53
NUP85-224ENST00000583948 PIGZQ86VD9 579 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 ZNF677Q86XU0 584 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 PASD1Q8IV76 773 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 SLC35F6Q8N357 371 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 ARL14Q8N4G2 192 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 WDR36Q8NI36 951 aaKnown RBP11.73□□□□□ -0.53
NUP85-224ENST00000583948 KIF18AQ8NI77 898 aa11.73□□□□□ -0.53
NUP85-224ENST00000583948 CCDC97Q96F63 343 aaPredicted RBP11.73□□□□□ -0.53
NUP85-224ENST00000583948 FAXDC2Q96IV6 333 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms