RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 ERVPABLB-1P60509 514 aa13.63□□□□□ -0.23
TRAF4-214ENST00000580073 SLC25A52Q3SY17 297 aa13.63□□□□□ -0.23
TRAF4-214ENST00000580073 ERICH1Q86X53 443 aa13.63□□□□□ -0.23
TRAF4-214ENST00000580073 OR13H1Q8NG92 308 aa13.63□□□□□ -0.23
TRAF4-214ENST00000580073 OR52K2Q8NGK3 314 aa13.63□□□□□ -0.23
TRAF4-214ENST00000580073 BTN2A2Q8WVV5 523 aa13.63□□□□□ -0.23
TRAF4-214ENST00000580073 CRELD1Q96HD1 420 aa13.63□□□□□ -0.23
TRAF4-214ENST00000580073 FEM1CQ96JP0 617 aa13.63□□□□□ -0.23
TRAF4-214ENST00000580073 HAPLN3Q96S86 360 aa13.63□□□□□ -0.23
TRAF4-214ENST00000580073 PSMB7Q99436 277 aa13.63□□□□□ -0.23
TRAF4-214ENST00000580073 ZYG11BQ9C0D3 744 aa13.63□□□□□ -0.23
TRAF4-214ENST00000580073 RETREG1Q9H6L5 497 aa13.63□□□□□ -0.23
TRAF4-214ENST00000580073 ATP13A1Q9HD20 1204 aa13.63□□□□□ -0.23
TRAF4-214ENST00000580073 DNAJC28Q9NX36 388 aa13.63□□□□□ -0.23
TRAF4-214ENST00000580073 CAPN11Q9UMQ6 739 aa13.63□□□□□ -0.23
TRAF4-214ENST00000580073 LRP4O75096 1905 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 COL27A1Q8IZC6 1860 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-214ENST00000580073 IGLV3-10A0A075B6K4 115 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 A0A1W2PQJ5 194 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 FPGTO14772 594 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 SCAMP1O15126 338 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 CBFA2T2O43439 604 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 LZTS3O60299 673 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-214ENST00000580073 SNAP91O60641 907 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 LEFTY1O75610 366 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 CNTN5O94779 1100 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 SKILP12757 684 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 CASP14P31944 242 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 L1CAMP32004 1257 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 CDH5P33151 784 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-214ENST00000580073 IRAK1P51617 712 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 CXADRP78310 365 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 GABREP78334 506 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 RHDQ02161 417 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 CCDC173Q0VFZ6 552 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 TBX2Q13207 712 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-214ENST00000580073 SGCGQ13326 291 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 ARL13BQ3SXY8 428 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 TMEM259Q4ZIN3 620 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 HGSNATQ68CP4 663 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 GCNT7Q6ZNI0 430 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 TMC6Q7Z403 805 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 TFAP2DQ7Z6R9 452 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 SPACA3Q8IXA5 215 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 SLC25A45Q8N413 288 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 TPCN2Q8NHX9 752 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 WDR48Q8TAF3 677 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 MAPK15Q8TD08 544 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 NT5C3BQ969T7 300 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 ARRDC3Q96B67 414 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 C18orf8Q96DM3 657 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 CCDC97Q96F63 343 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-214ENST00000580073 APOLD1Q96LR9 279 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 HEPHQ9BQS7 1158 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 C1QTNF7Q9BXJ2 289 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 EDEM3Q9BZQ6 932 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 POLR1BQ9H9Y6 1135 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 FZD3Q9NPG1 666 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 AIPL1Q9NZN9 384 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 PPARGC1AQ9UBK2 798 aaKnown RBP13.62□□□□□ -0.23
TRAF4-214ENST00000580073 IPO11Q9UI26 975 aaKnown RBP13.62□□□□□ -0.23
TRAF4-214ENST00000580073 HPCAL4Q9UM19 191 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 MYO6Q9UM54 1294 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 CA5BQ9Y2D0 317 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 CSNK1G3Q9Y6M4 447 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 LRRK1Q38SD2 2015 aa13.62□□□□□ -0.23
TRAF4-214ENST00000580073 DRGXA6NNA5 263 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 NEMP1O14524 444 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 TSPAN6O43657 245 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 OPA1O60313 960 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 MT-CO1P00395 513 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 CYP1A1P04798 512 aaPredicted RBP13.61□□□□□ -0.23
TRAF4-214ENST00000580073 NME1P15531 152 aaKnown RBP13.61□□□□□ -0.23
TRAF4-214ENST00000580073 GABRB2P47870 512 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 RPIAP49247 311 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 RNASE9P60153 205 aaKnown RBP13.61□□□□□ -0.23
TRAF4-214ENST00000580073 CDR2Q01850 454 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 TLE3Q04726 772 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 MAPK8IP2Q13387 824 aaPredicted RBP13.61□□□□□ -0.23
TRAF4-214ENST00000580073 PTK2BQ14289 1009 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 POLD3Q15054 466 aaPredicted RBP13.61□□□□□ -0.23
TRAF4-214ENST00000580073 ALFQ53S48 1182 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 C2CD6Q53TS8 623 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 ARSIQ5FYB1 569 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 OTUD1Q5VV17 481 aaPredicted RBP13.61□□□□□ -0.23
TRAF4-214ENST00000580073 CDCP2Q5VXM1 449 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 DPY19L3Q6ZPD9 716 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 Q6ZSR6 202 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 ARCQ7LC44 396 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 ZNF571Q7Z3V5 609 aaPredicted RBP13.61□□□□□ -0.23
TRAF4-214ENST00000580073 C14orf80Q86SX3 495 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 DNAAF5Q86Y56 855 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 ZNF548Q8NEK5 533 aaPredicted RBP13.61□□□□□ -0.23
TRAF4-214ENST00000580073 KCNE4Q8WWG9 221 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 KLK6Q92876 244 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 OSBPL1AQ9BXW6 950 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 SLC17A9Q9BYT1 436 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 DPH1Q9BZG8 443 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 TRIM5Q9C035 493 aa13.61□□□□□ -0.23
TRAF4-214ENST00000580073 GPR27Q9NS67 375 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms