RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 SEMA4BQ9NPR2 832 aaPredicted RBP3.28□□□□□ -1.88
KPNB1-208ENST00000580019 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.28□□□□□ -1.88
KPNB1-208ENST00000580019 ING3Q9NXR8 418 aa3.28□□□□□ -1.88
KPNB1-208ENST00000580019 COQ3Q9NZJ6 369 aa3.28□□□□□ -1.88
KPNB1-208ENST00000580019 MPP6Q9NZW5 540 aa3.28□□□□□ -1.88
KPNB1-208ENST00000580019 FOXJ2Q9P0K8 574 aa3.28□□□□□ -1.88
KPNB1-208ENST00000580019 CACNG4Q9UBN1 327 aa3.28□□□□□ -1.88
KPNB1-208ENST00000580019 SLCO3A1Q9UIG8 710 aa3.28□□□□□ -1.88
KPNB1-208ENST00000580019 PPIEQ9UNP9 301 aaKnown RBP3.28□□□□□ -1.88
KPNB1-208ENST00000580019 COG5Q9UP83 839 aa3.28□□□□□ -1.88
KPNB1-208ENST00000580019 DRG1Q9Y295 367 aaKnown RBP3.28□□□□□ -1.88
KPNB1-208ENST00000580019 KLHL20Q9Y2M5 609 aa3.28□□□□□ -1.88
KPNB1-208ENST00000580019 RAPGEF6Q8TEU7 1601 aa3.28□□□□□ -1.88
KPNB1-208ENST00000580019 ATP10AO60312 1499 aa3.28□□□□□ -1.88
KPNB1-208ENST00000580019 CDK12Q9NYV4 1490 aaPredicted RBP3.28□□□□□ -1.88
KPNB1-208ENST00000580019 ATRNL1Q5VV63 1379 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 RNF17Q9BXT8 1623 aaKnown RBP3.27□□□□□ -1.89
KPNB1-208ENST00000580019 IQGAP2Q13576 1575 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 ARHGAP10A1A4S6 786 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 GLOD5A6NK44 160 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 SLC38A8A6NNN8 435 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 H0YAE9 185 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 CTDSP2O14595 271 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 NRP1O14786 923 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 ASAP2O43150 1006 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 TGFB1I1O43294 461 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 DHHO43323 396 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 TXNL1O43396 289 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 MOSPD3O75425 235 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 KIF20AO95235 890 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 FYNP06241 537 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 ATXN1LP0C7T5 689 aaKnown RBP3.27□□□□□ -1.89
KPNB1-208ENST00000580019 PCP11498 1178 aaKnown RBP3.27□□□□□ -1.89
KPNB1-208ENST00000580019 FDPSP14324 419 aaKnown RBP3.27□□□□□ -1.89
KPNB1-208ENST00000580019 CHN1P15882 459 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 PTPN2P17706 415 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 MCM3P25205 808 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 MT3P25713 68 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 PRKAR1BP31321 381 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 NRIP1P48552 1158 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 AMPHP49418 695 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 CSE1LP55060 971 aaKnown RBP3.27□□□□□ -1.89
KPNB1-208ENST00000580019 POLR2FP61218 127 aaKnown RBP3.27□□□□□ -1.89
KPNB1-208ENST00000580019 PSMC6P62333 389 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 SCN1BQ07699 218 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 TCF15Q12870 199 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 TMEM115Q12893 351 aaPredicted RBP3.27□□□□□ -1.89
KPNB1-208ENST00000580019 SLC14A1Q13336 389 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 NFE2L1Q14494 772 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 IRF3Q14653 427 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 NAA25Q14CX7 972 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 SF3B3Q15393 1217 aaKnown RBP3.27□□□□□ -1.89
KPNB1-208ENST00000580019 P3H1Q32P28 736 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 ZNF628Q5EBL2 1059 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 AKNAD1Q5T1N1 836 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 MEX3CQ5U5Q3 659 aaKnown RBP3.27□□□□□ -1.89
KPNB1-208ENST00000580019 KIAA1161Q6NSJ0 714 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 TTI2Q6NXR4 508 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 CDC73Q6P1J9 531 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 LAYNQ6UX15 382 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 MED25Q71SY5 747 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 RRM2BQ7LG56 351 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 TICAM1Q8IUC6 712 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 TUSC5Q8IXB3 177 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 SLC17A8Q8NDX2 589 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 OR6J1Q8NGC5 347 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 KIF18AQ8NI77 898 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 SPATA18Q8TC71 538 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 SLC2A12Q8TD20 617 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 BPIFB1Q8TDL5 484 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 DENND1AQ8TEH3 1009 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 HASPINQ8TF76 798 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 PPP2R3CQ969Q6 453 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 FAM149B1Q96BN6 582 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 ELP4Q96EB1 424 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 SAT2Q96F10 170 aaPredicted RBP3.27□□□□□ -1.89
KPNB1-208ENST00000580019 BICD1Q96G01 975 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 MASTLQ96GX5 879 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 PGAM5Q96HS1 289 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 CCDC114Q96M63 670 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 TMEM237Q96Q45 408 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 HIST1H2AAQ96QV6 131 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 ABHD1Q96SE0 405 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 ATP6V0BQ99437 205 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 EIF3CQ99613 913 aaKnown RBP3.27□□□□□ -1.89
KPNB1-208ENST00000580019 PIP5K1AQ99755 562 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 MYOCQ99972 504 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 PAAF1Q9BRP4 392 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 TUBB6Q9BUF5 446 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 MECRQ9BV79 373 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 MRPL1Q9BYD6 325 aaKnown RBP3.27□□□□□ -1.89
KPNB1-208ENST00000580019 GSTO2Q9H4Y5 243 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 THAP9Q9H5L6 903 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 MID1IP1Q9NPA3 183 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 SNTG1Q9NSN8 517 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 ASB6Q9NWX5 421 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 HESX1Q9UBX0 185 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 SLC23A1Q9UHI7 598 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 SLC45A2Q9UMX9 530 aa3.27□□□□□ -1.89
KPNB1-208ENST00000580019 DUSP12Q9UNI6 340 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms