RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 ABL2P42684 1182 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 GPD2P43304 727 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 RPS21P63220 83 aaKnown RBP11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 TAF5Q15542 800 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 ACCSLQ4AC99 568 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 PRRT3Q5FWE3 981 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 DOPEY1Q5JWR5 2465 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 ZNF658Q5TYW1 1059 aaPredicted RBP11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 ISM2Q6H9L7 571 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 KIAA1161Q6NSJ0 714 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 DPY19L3Q6ZPD9 716 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 JAMLQ86YT9 394 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 FAM186BQ8IYM0 893 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 PHACTR4Q8IZ21 702 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 SDR16C5Q8N3Y7 309 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 GPR156Q8NFN8 814 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 NKD1Q969G9 470 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 SPRY4Q9C004 299 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 B3GNT4Q9C0J1 378 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 MIS12Q9H081 205 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 LRRN3Q9H3W5 708 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 ANLNQ9NQW6 1124 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 SPASTQ9UBP0 616 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 HESX1Q9UBX0 185 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 ZNF212Q9UDV6 495 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 APOBEC3BQ9UH17 382 aaKnown RBP11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 HOOK1Q9UJC3 728 aaKnown RBP11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 ANAPC2Q9UJX6 822 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 KIAA1257Q9ULG3 409 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 AKAP9Q99996 3911 aa11.39□□□□□ -0.59
SUPT4H1-203ENST00000579289 ZFHX3Q15911 3703 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 IGLON5A6NGN9 336 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 H3BM21 787 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 K7EM74 188 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 ZMPSTE24O75844 475 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 CNTN5O94779 1100 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 FBXO21O94952 628 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 TRUB2O95900 331 aaKnown RBP11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 RPLP0P05388 317 aaKnown RBP11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 KRT13P13646 458 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 ADRB3P13945 408 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 PSMC2P35998 433 aaKnown RBP11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 RPIAP49247 311 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 MXI1P50539 228 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 AUHQ13825 339 aaKnown RBP11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 C16orf72Q14CZ0 275 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 EDRF1Q3B7T1 1238 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 OTUD1Q5VV17 481 aaPredicted RBP11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 ANKRD40Q6AI12 368 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 BORAQ6PGQ7 559 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 PARS2Q7L3T8 475 aaKnown RBP11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 ELOA2Q8IYF1 753 aaPredicted RBP11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 BTN2A2Q8WVV5 523 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 KAT5Q92993 513 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 GFM1Q96RP9 751 aaKnown RBP11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 SLC4A5Q9BY07 1137 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 MBNL1Q9NR56 388 aaKnown RBP11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 CHMP5Q9NZZ3 219 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 VPS51Q9UID3 782 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 SLC25A13Q9UJS0 675 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 APPL1Q9UKG1 709 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 MAN1B1Q9UKM7 699 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 PAXBP1Q9Y5B6 917 aa11.38□□□□□ -0.59
SUPT4H1-203ENST00000579289 A0A0D9SEW6 157 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 ENO4A6NNW6 628 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 F5H5T6 163 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 AREL1O15033 823 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 PAEPP09466 180 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 CCL4P13236 92 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 CD19P15391 556 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 ZNF18P17022 549 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 L1CAMP32004 1257 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 PMS1P54277 932 aaKnown RBP11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 NCAPHQ15003 741 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 ALFQ53S48 1182 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 COBLL1Q53SF7 1204 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 TTC39BQ5VTQ0 682 aaPredicted RBP11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 OGFOD3Q6PK18 319 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 ARL10Q8N8L6 244 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 DENND6BQ8NEG7 585 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 LMO3Q8TAP4 145 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 CPEB1Q9BZB8 566 aaKnown RBP11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 TNKS2Q9H2K2 1166 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 ITM2BQ9Y287 266 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 DAAM1Q9Y4D1 1078 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 ACTL7AQ9Y615 435 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 HS3ST4Q9Y661 456 aa11.37□□□□□ -0.59
SUPT4H1-203ENST00000579289 TRIM49BA6NDI0 452 aa11.36□□□□□ -0.59
SUPT4H1-203ENST00000579289 TMX2-CTNND1H3BSU7 103 aa11.36□□□□□ -0.59
SUPT4H1-203ENST00000579289 FPGTO14772 594 aa11.36□□□□□ -0.59
SUPT4H1-203ENST00000579289 CETN3O15182 167 aa11.36□□□□□ -0.59
SUPT4H1-203ENST00000579289 MTSS1O43312 755 aa11.36□□□□□ -0.59
SUPT4H1-203ENST00000579289 BNIP3LO60238 219 aa11.36□□□□□ -0.59
SUPT4H1-203ENST00000579289 PRNPP04156 253 aa11.36□□□□□ -0.59
SUPT4H1-203ENST00000579289 LIFP15018 202 aa11.36□□□□□ -0.59
SUPT4H1-203ENST00000579289 CD44P16070 742 aaKnown RBP11.36□□□□□ -0.59
SUPT4H1-203ENST00000579289 BRD2P25440 801 aaKnown RBP11.36□□□□□ -0.59
SUPT4H1-203ENST00000579289 GGCXP38435 758 aa11.36□□□□□ -0.59
SUPT4H1-203ENST00000579289 ANP32AP39687 249 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms