RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 PDCL3Q9H2J4 239 aa12.86□□□□□ -0.35
CDK5RAP3-212ENST00000579175 CLMPQ9H6B4 373 aa12.86□□□□□ -0.35
CDK5RAP3-212ENST00000579175 ZDHHC6Q9H6R6 413 aa12.86□□□□□ -0.35
CDK5RAP3-212ENST00000579175 PIGVQ9NUD9 493 aa12.86□□□□□ -0.35
CDK5RAP3-212ENST00000579175 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDK5RAP3-212ENST00000579175 STAP1Q9ULZ2 295 aa12.86□□□□□ -0.35
CDK5RAP3-212ENST00000579175 PAXBP1Q9Y5B6 917 aa12.86□□□□□ -0.35
CDK5RAP3-212ENST00000579175 CSNK1G3Q9Y6M4 447 aa12.86□□□□□ -0.35
CDK5RAP3-212ENST00000579175 U3KQA8 63 aa12.86□□□□□ -0.35
CDK5RAP3-212ENST00000579175 IGLON5A6NGN9 336 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 GOLGA6L6A8MZA4 724 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 RAD51BO15315 384 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 SLC28A2O43868 658 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 FGFR1OPO95684 399 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 ERBB2P04626 1255 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 NME1P15531 152 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 L1CAMP32004 1257 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 RPIAP49247 311 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 ZNF75DP51815 510 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 THOP1P52888 689 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 C1orf61Q13536 156 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 FGL2Q14314 439 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 DRAP1Q14919 205 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 C5orf22Q49AR2 442 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 TMEM259Q4ZIN3 620 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 CARD16Q5EG05 197 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 BRMS1LQ5PSV4 323 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 OLFML1Q6UWY5 402 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 PRICKLE2Q7Z3G6 844 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 ENOX1Q8TC92 643 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 BTN2A2Q8WVV5 523 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 TTC9Q92623 222 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 GRAMD1AQ96CP6 724 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 MED8Q96G25 268 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 MRFAP1L1Q96HT8 127 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 ATP13A1Q9HD20 1204 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 RRN3Q9NYV6 651 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 SPASTQ9UBP0 616 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 SALL4Q9UJQ4 1053 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 DOLKQ9UPQ8 538 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 ENTPD2Q9Y5L3 495 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 FADS3Q9Y5Q0 445 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 HEMK1Q9Y5R4 338 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 WASF2Q9Y6W5 498 aa12.85□□□□□ -0.35
CDK5RAP3-212ENST00000579175 CFAP46Q8IYW2 2715 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 FAM170AA1A519 330 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 EME2A4GXA9 379 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 PPP1R3GB7ZBB8 358 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 K7ENP7 123 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 TNFSF15O95150 251 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 F9P00740 461 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 TPM3P06753 285 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 ANXA6P08133 673 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 TFE3P19532 575 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 SLC9A1P19634 815 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 ITGB7P26010 798 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 CXCR3P49682 368 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 ADKP55263 362 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 PAK1Q13153 545 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 PRRT3Q5FWE3 981 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 PERM1Q5SV97 790 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 FAXCQ5TGI0 409 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 INO80CQ6PI98 192 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 TRIM65Q6PJ69 517 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 SLC26A9Q7LBE3 791 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 PCDH20Q8N6Y1 951 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 WDR36Q8NI36 951 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 SLC13A1Q9BZW2 595 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 TM6SF2Q9BZW4 377 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 TRIM5Q9C035 493 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 PLCB1Q9NQ66 1216 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 TMPRSS4Q9NRS4 437 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 ARHGEF38Q9NXL2 777 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 APOBEC3BQ9UH17 382 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 KLF15Q9UIH9 416 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 PCDHGC3Q9UN70 934 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 FCF1Q9Y324 198 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 COL6A6A6NMZ7 2263 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 MGAQ8IWI9 3026 aa12.84□□□□□ -0.35
CDK5RAP3-212ENST00000579175 ILVBLA1L0T0 632 aa12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 DRGXA6NNA5 263 aa12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 RIOK3O14730 519 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 TSPAN6O43657 245 aa12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 PTMAP06454 111 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 SERPINH1P50454 418 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 CCNHP51946 323 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 APBA1Q02410 837 aa12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 SLC20A2Q08357 652 aa12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 SPIDRQ14159 915 aa12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 PTK2BQ14289 1009 aa12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 ESRP1Q6NXG1 681 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 GBP6Q6ZN66 633 aa12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 JAMLQ86YT9 394 aa12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 DRC7Q8IY82 874 aa12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 RBFAQ8N0V3 343 aa12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 OR6K2Q8NGY2 324 aa12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 TBCBQ99426 244 aa12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 NPY6RQ99463 290 aa12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 ARHGAP9Q9BRR9 750 aa12.83□□□□□ -0.36
CDK5RAP3-212ENST00000579175 C1QTNF2Q9BXJ5 285 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms