RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 MYO1FO00160 1098 aa15.08■□□□□ 0
SS18-212ENST00000579061 RNF103O00237 685 aa15.08■□□□□ 0
SS18-212ENST00000579061 GIPC1O14908 333 aa15.08■□□□□ 0
SS18-212ENST00000579061 MAGEC1O60732 1142 aa15.08■□□□□ 0
SS18-212ENST00000579061 H2AFZP0C0S5 128 aa15.08■□□□□ 0
SS18-212ENST00000579061 IL1R2P27930 398 aa15.08■□□□□ 0
SS18-212ENST00000579061 PMLP29590 882 aa15.08■□□□□ 0
SS18-212ENST00000579061 ARL4AP40617 200 aa15.08■□□□□ 0
SS18-212ENST00000579061 OVGP1Q12889 678 aa15.08■□□□□ 0
SS18-212ENST00000579061 SUZ12Q15022 739 aaKnown RBP15.08■□□□□ 0
SS18-212ENST00000579061 ASTE1Q2TB18 679 aaPredicted RBP15.08■□□□□ 0
SS18-212ENST00000579061 MYLK3Q32MK0 819 aa15.08■□□□□ 0
SS18-212ENST00000579061 PPP6R3Q5H9R7 873 aaPredicted RBP15.08■□□□□ 0
SS18-212ENST00000579061 AFMIDQ63HM1 303 aa15.08■□□□□ 0
SS18-212ENST00000579061 SARM1Q6SZW1 724 aa15.08■□□□□ 0
SS18-212ENST00000579061 H2AFVQ71UI9 128 aa15.08■□□□□ 0
SS18-212ENST00000579061 IQCHQ86VS3 1027 aa15.08■□□□□ 0
SS18-212ENST00000579061 HORMAD1Q86X24 394 aa15.08■□□□□ 0
SS18-212ENST00000579061 MFSD2AQ8NA29 543 aa15.08■□□□□ 0
SS18-212ENST00000579061 RAB7BQ96AH8 199 aa15.08■□□□□ 0
SS18-212ENST00000579061 ARHGEF26Q96DR7 871 aa15.08■□□□□ 0
SS18-212ENST00000579061 GDAP1L1Q96MZ0 367 aa15.08■□□□□ 0
SS18-212ENST00000579061 IL21RQ9HBE5 538 aa15.08■□□□□ 0
SS18-212ENST00000579061 PDFQ9HBH1 243 aa15.08■□□□□ 0
SS18-212ENST00000579061 AASDHPPTQ9NRN7 309 aa15.08■□□□□ 0
SS18-212ENST00000579061 CWC15Q9P013 229 aaKnown RBP15.08■□□□□ 0
SS18-212ENST00000579061 UVRAGQ9P2Y5 699 aa15.08■□□□□ 0
SS18-212ENST00000579061 UBA2Q9UBT2 640 aaPredicted RBP15.08■□□□□ 0
SS18-212ENST00000579061 LCMT1Q9UIC8 334 aa15.08■□□□□ 0
SS18-212ENST00000579061 FNDC3AQ9Y2H6 1198 aaKnown RBP15.08■□□□□ 0
SS18-212ENST00000579061 MFHAS1Q9Y4C4 1052 aa15.08■□□□□ 0
SS18-212ENST00000579061 PRAMEF26H0Y7S4 382 aa15.07■□□□□ 0
SS18-212ENST00000579061 H3BRJ5 948 aa15.07■□□□□ 0
SS18-212ENST00000579061 FLRT2O43155 660 aa15.07■□□□□ 0
SS18-212ENST00000579061 SH3BP5O60239 455 aa15.07■□□□□ 0
SS18-212ENST00000579061 PRAMEF11O60813 436 aa15.07■□□□□ 0
SS18-212ENST00000579061 MFAP3LO75121 409 aa15.07■□□□□ 0
SS18-212ENST00000579061 IGSF6O95976 241 aa15.07■□□□□ 0
SS18-212ENST00000579061 WNT1P04628 370 aa15.07■□□□□ 0
SS18-212ENST00000579061 RARAP10276 462 aa15.07■□□□□ 0
SS18-212ENST00000579061 ADRB3P13945 408 aa15.07■□□□□ 0
SS18-212ENST00000579061 CCT8P50990 548 aa15.07■□□□□ 0
SS18-212ENST00000579061 DPYSQ14117 519 aa15.07■□□□□ 0
SS18-212ENST00000579061 GRM3Q14832 879 aa15.07■□□□□ 0
SS18-212ENST00000579061 ZNF805Q5CZA5 627 aa15.07■□□□□ 0
SS18-212ENST00000579061 KCNT1Q5JUK3 1230 aa15.07■□□□□ 0
SS18-212ENST00000579061 FBXL19Q6PCT2 694 aa15.07■□□□□ 0
SS18-212ENST00000579061 LEKR1Q6ZMV7 388 aa15.07■□□□□ 0
SS18-212ENST00000579061 NAXDQ8IW45 347 aa15.07■□□□□ 0
SS18-212ENST00000579061 RYBPQ8N488 228 aaPredicted RBP15.07■□□□□ 0
SS18-212ENST00000579061 ZNF564Q8TBZ8 553 aaPredicted RBP15.07■□□□□ 0
SS18-212ENST00000579061 VOPP1Q96AW1 172 aa15.07■□□□□ 0
SS18-212ENST00000579061 FEM1CQ96JP0 617 aa15.07■□□□□ 0
SS18-212ENST00000579061 CPEB1Q9BZB8 566 aaKnown RBP15.07■□□□□ 0
SS18-212ENST00000579061 SLC39A8Q9C0K1 460 aa15.07■□□□□ 0
SS18-212ENST00000579061 DEF6Q9H4E7 631 aa15.07■□□□□ 0
SS18-212ENST00000579061 ABHD10Q9NUJ1 306 aa15.07■□□□□ 0
SS18-212ENST00000579061 FADS3Q9Y5Q0 445 aa15.07■□□□□ 0
SS18-212ENST00000579061 A0A1W2PQU0 124 aa15.06■□□□□ 0
SS18-212ENST00000579061 H0Y8X5 98 aa15.06■□□□□ 0
SS18-212ENST00000579061 TLR4O00206 839 aa15.06■□□□□ 0
SS18-212ENST00000579061 KRIT1O00522 736 aa15.06■□□□□ 0
SS18-212ENST00000579061 YKT6O15498 198 aa15.06■□□□□ 0
SS18-212ENST00000579061 PCDHGA12O60330 932 aa15.06■□□□□ 0
SS18-212ENST00000579061 PCDH8O95206 1070 aa15.06■□□□□ 0
SS18-212ENST00000579061 MAT2AP31153 395 aaKnown RBP15.06■□□□□ 0
SS18-212ENST00000579061 PAPOLAP51003 745 aaKnown RBP15.06■□□□□ 0
SS18-212ENST00000579061 RHOAP61586 193 aa15.06■□□□□ 0
SS18-212ENST00000579061 SHC2P98077 582 aa15.06■□□□□ 0
SS18-212ENST00000579061 SLC25A11Q02978 314 aaKnown RBP15.06■□□□□ 0
SS18-212ENST00000579061 STAT4Q14765 748 aa15.06■□□□□ 0
SS18-212ENST00000579061 CYTH1Q15438 398 aa15.06■□□□□ 0
SS18-212ENST00000579061 HADHQ16836 314 aaKnown RBP15.06■□□□□ 0
SS18-212ENST00000579061 TMEM259Q4ZIN3 620 aa15.06■□□□□ 0
SS18-212ENST00000579061 ATXN7L2Q5T6C5 722 aaPredicted RBP15.06■□□□□ 0
SS18-212ENST00000579061 KIAA1161Q6NSJ0 714 aa15.06■□□□□ 0
SS18-212ENST00000579061 LAYNQ6UX15 382 aa15.06■□□□□ 0
SS18-212ENST00000579061 PARS2Q7L3T8 475 aaKnown RBP15.06■□□□□ 0
SS18-212ENST00000579061 POLNQ7Z5Q5 900 aa15.06■□□□□ 0
SS18-212ENST00000579061 CNGA4Q8IV77 575 aa15.06■□□□□ 0
SS18-212ENST00000579061 ARHGAP12Q8IWW6 846 aa15.06■□□□□ 0
SS18-212ENST00000579061 TMEM145Q8NBT3 493 aa15.06■□□□□ 0
SS18-212ENST00000579061 FAM174AQ8TBP5 190 aa15.06■□□□□ 0
SS18-212ENST00000579061 CTNNBL1Q8WYA6 563 aaPredicted RBP15.06■□□□□ 0
SS18-212ENST00000579061 CELF6Q96J87 481 aaKnown RBP15.06■□□□□ 0
SS18-212ENST00000579061 BTBD6Q96KE9 485 aa15.06■□□□□ 0
SS18-212ENST00000579061 ERVMER34-1Q9H9K5 563 aa15.06■□□□□ 0
SS18-212ENST00000579061 GDF3Q9NR23 364 aa15.06■□□□□ 0
SS18-212ENST00000579061 CTTNBP2NLQ9P2B4 639 aa15.06■□□□□ 0
SS18-212ENST00000579061 DKK3Q9UBP4 350 aa15.06■□□□□ 0
SS18-212ENST00000579061 PCDHB9Q9Y5E1 797 aa15.06■□□□□ 0
SS18-212ENST00000579061 ANKRD36A6QL64 1941 aa15.05■□□□□ 0
SS18-212ENST00000579061 TPRP12270 2363 aaKnown RBP15.05■□□□□ 0
SS18-212ENST00000579061 A0A1B0GTQ1 180 aa15.05■□□□□ -0
SS18-212ENST00000579061 C16orf96A6NNT2 1141 aa15.05■□□□□ -0
SS18-212ENST00000579061 J3KR12 359 aa15.05■□□□□ -0
SS18-212ENST00000579061 WNT9AO14904 365 aa15.05■□□□□ -0
SS18-212ENST00000579061 TSPAN6O43657 245 aa15.05■□□□□ -0
SS18-212ENST00000579061 AKR1B10O60218 316 aa15.05■□□□□ -0
SS18-212ENST00000579061 CBFA2T3O75081 653 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms