RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 TBC1D3BA6NDS4 549 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 SHISA7A6NL88 538 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 TIMM44O43615 452 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 ATP5BP06576 529 aaKnown RBP14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 POLR2EP19388 210 aaKnown RBP14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 DRD1P21728 446 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 CA4P22748 312 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 TARSP26639 723 aaKnown RBP14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 PSMB4P28070 264 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 GRIA2P42262 883 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 STARD6P59095 220 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 MESP2Q0VG99 397 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 ZBTB17Q13105 803 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 MPP3Q13368 585 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 HIF1AQ16665 826 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 GEN1Q17RS7 908 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 FUT11Q495W5 492 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 DNAJC21Q5F1R6 531 aaKnown RBP14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 TMEM196Q5HYL7 178 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 SPDYCQ5MJ68 293 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 FSTL4Q6MZW2 842 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 TRIM67Q6ZTA4 783 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 PRUNE1Q86TP1 453 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.14□□□□□ -0.159e-6■■■□□ 15.9
CSNK1D-209ENST00000578904 NAT8LQ8N9F0 302 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 AENQ8WTP8 325 aaKnown RBP14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 LRRN4Q8WUT4 740 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 CPT1BQ92523 772 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 SLC25A51Q9H1U9 297 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 ACBD3Q9H3P7 528 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 EPHX3Q9H6B9 360 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 LRRC40Q9H9A6 602 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 PDFQ9HBH1 243 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 FBRSL1Q9HCM7 1045 aaKnown RBP14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 NT5MQ9NPB1 228 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 LTB4R2Q9NPC1 389 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 VPS45Q9NRW7 570 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 ATP8A1Q9Y2Q0 1164 aa14.14□□□□□ -0.15
CSNK1D-209ENST00000578904 F5P12259 2224 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 TMEM221A6NGB7 291 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 M0R296 226 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 METTL18O95568 372 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 EGFP01133 1207 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 ASLP04424 464 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 MLNP12872 115 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 NFKB1P19838 968 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 MZF1P28698 734 aaPredicted RBP14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 MAPK8P45983 427 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 NUMBP49757 651 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 NSUN2Q08J23 767 aaKnown RBP eCLIP14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 SLC10A7Q0GE19 358 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 KCNJ11Q14654 390 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 SLC14A2Q15849 920 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 PITRM1Q5JRX3 1037 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 FBXO38Q6PIJ6 1188 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 ZDHHC24Q6UX98 284 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 HDXQ7Z353 690 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 CCDC25Q86WR0 208 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 SFTPA1Q8IWL2 248 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 FLCNQ8NFG4 579 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 OR52K2Q8NGK3 314 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 UCMAQ8WVF2 138 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 PRCCQ92733 491 aaPredicted RBP14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 PKNOX2Q96KN3 472 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 LMLNQ96KR4 655 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 TTC25Q96NG3 672 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 PSKH2Q96QS6 385 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 FSD1LQ9BXM9 530 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 CEP41Q9BYV8 373 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 FOXQ1Q9C009 403 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 CIPCQ9C0C6 399 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 FAM153AQ9UHL3 310 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 VPS51Q9UID3 782 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 OR51B4Q9Y5P0 310 aa14.13□□□□□ -0.15
CSNK1D-209ENST00000578904 AP2A1O95782 977 aa14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 PEX11BO96011 259 aa14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 HLA-DQB2P05538 268 aa14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 SERPINF2P08697 491 aa14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 SEC13P55735 322 aa14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 DHX9Q08211 1270 aaKnown RBP14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 LRRC32Q14392 662 aa14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 EIF4HQ15056 248 aaKnown RBP14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 TRADDQ15628 312 aa14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 TMEM31Q5JXX7 168 aa14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 MBLAC2Q68D91 279 aa14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 TRMT10CQ7L0Y3 403 aaKnown RBP14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 KIAA0907Q7Z7F0 614 aaPredicted RBP14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 APCDD1Q8J025 514 aa14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 TAB3Q8N5C8 712 aaPredicted RBP14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 LRRC39Q96DD0 335 aa14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 ALG14Q96F25 216 aa14.12□□□□□ -0.15
CSNK1D-209ENST00000578904 RBM15Q96T37 977 aaKnown RBP eCLIP14.12□□□□□ -0.156e-8■■■□□ 17.2
CSNK1D-209ENST00000578904 FAM170BA6NMN3 283 aa14.11□□□□□ -0.15
CSNK1D-209ENST00000578904 PRRT4C9JH25 899 aa14.11□□□□□ -0.15
CSNK1D-209ENST00000578904 ATP8B1O43520 1251 aa14.11□□□□□ -0.15
CSNK1D-209ENST00000578904 ZMPSTE24O75844 475 aa14.11□□□□□ -0.15
CSNK1D-209ENST00000578904 TMCC1O94876 653 aa14.11□□□□□ -0.15
CSNK1D-209ENST00000578904 SUN1O94901 812 aa14.11□□□□□ -0.15
CSNK1D-209ENST00000578904 SRPRAP08240 638 aaKnown RBP14.11□□□□□ -0.15
CSNK1D-209ENST00000578904 MYBL2P10244 700 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms