RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 TBC1D3KA0A087X1G2 549 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 TBC1D3FA6NER0 549 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 ARHGAP42A6NI28 874 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 UPK3BL1B0FP48 263 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 TBC1D3LB9A6J9 549 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 UPK3BL2E5RIL1 263 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 KPNA3O00505 521 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 HYAL3O43820 417 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 TMCC1O94876 653 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 POP4O95707 220 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 TBC1D3HP0C7X1 549 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 RARAP10276 462 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 TCF4P15884 667 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 ITGB7P26010 798 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 ARL4AP40617 200 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 MAPK8P45983 427 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 GRIA4P48058 902 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 DNA2P51530 1060 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 TAS2R38P59533 333 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 RACK1P63244 317 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 GRIK2Q13002 908 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 TEAD4Q15561 434 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 HADHQ16836 314 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 SMTNL2Q2TAL5 461 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 POM121L1PQ3SYA9 428 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 KCNT1Q5JUK3 1230 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 TBC1D3GQ6DHY5 549 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 TBC1D3CQ6IPX1 549 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 ERN2Q76MJ5 926 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 TRIM69Q86WT6 500 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 ZNF354CQ86Y25 554 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 TBC1D3Q8IZP1 549 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 MINDY1Q8N5J2 469 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 TC2NQ8N9U0 490 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 FAM71BQ8TC56 605 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 OSBPL1AQ9BXW6 950 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 PACSIN1Q9BY11 444 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 SLC39A8Q9C0K1 460 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 PDFQ9HBH1 243 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 FSCN3Q9NQT6 498 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 CTTNBP2NLQ9P2B4 639 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 RCOR3Q9P2K3 495 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 INTUQ9ULD6 942 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 MFHAS1Q9Y4C4 1052 aa13.87□□□□□ -0.19
CSNK1D-208ENST00000578501 PLK4O00444 970 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 PRAMEF11O60813 436 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 GJB3O75712 270 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 PROSCO94903 275 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 MAN1A1P33908 653 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 PAPOLAP51003 745 aaKnown RBP13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 SLC14A1Q13336 389 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 MYLK3Q32MK0 819 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 PRPF39Q86UA1 669 aaKnown RBP13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 ARHGAP12Q8IWW6 846 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 GRIN3AQ8TCU5 1115 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 TSC1Q92574 1164 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 HSPH1Q92598 858 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 VOPP1Q96AW1 172 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 ARRDC3Q96B67 414 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 GDAP1L1Q96MZ0 367 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 CSPG4P5Q96PW8 444 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 GTPBP2Q9BX10 602 aaKnown RBP13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 TM6SF2Q9BZW4 377 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 EBF2Q9HAK2 575 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 UBA2Q9UBT2 640 aaPredicted RBP13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 DMTF1Q9Y222 760 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 SLCO1B1Q9Y6L6 691 aa13.86□□□□□ -0.19
CSNK1D-208ENST00000578501 FAM221BA6H8Z2 402 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 J3KR12 359 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 RNF103O00237 685 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 VILLO15195 856 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 OPHN1O60890 802 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 MTA2O94776 668 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 IGSF6O95976 241 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 ZNF883P0CG24 379 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 ARHGAP25P42331 645 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 CSNK1EP49674 416 aaKnown RBP13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 ARSEP51690 589 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 ZNF75DP51815 510 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 NEK3P51956 506 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 PPP2CBP62714 309 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 PPP2CAP67775 309 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 BNC1Q01954 994 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 RAD51Q06609 339 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 RFTN1Q14699 578 aaPredicted RBP13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 TCEAL1Q15170 157 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 CYTH1Q15438 398 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 ZNF805Q5CZA5 627 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 TXNRD3NBQ6F5E7 133 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 LEKR1Q6ZMV7 388 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 GAS2L3Q86XJ1 694 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 PROSER1Q86XN7 944 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 RHOT2Q8IXI1 618 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 NPWQ8N729 165 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 SLC35G2Q8TBE7 412 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 SKA1Q96BD8 255 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 CELF6Q96J87 481 aaKnown RBP13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 ZDHHC6Q9H6R6 413 aa13.85□□□□□ -0.19
CSNK1D-208ENST00000578501 PCDH18Q9HCL0 1135 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms