RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 TIGD7Q6NT04 549 aaPredicted RBP8.17□□□□□ -1.1
COPS3-215ENST00000578317 DARS2Q6PI48 645 aaKnown RBP8.17□□□□□ -1.1
COPS3-215ENST00000578317 C4orf22Q6V702 233 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 ZC3H18Q86VM9 953 aaKnown RBP8.17□□□□□ -1.1
COPS3-215ENST00000578317 CDKL3Q8IVW4 592 aaPredicted RBP8.17□□□□□ -1.1
COPS3-215ENST00000578317 MFN1Q8IWA4 741 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 TP53INP2Q8IXH6 220 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 CCDC105Q8IYK2 499 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 CARNMT1Q8N4J0 409 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 CPA6Q8N4T0 437 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 TEX26Q8N6G2 289 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 ALLCQ8N6M5 410 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 HTR3CQ8WXA8 447 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 MAML1Q92585 1016 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 HMCESQ96FZ2 354 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 CELF6Q96J87 481 aaKnown RBP8.17□□□□□ -1.1
COPS3-215ENST00000578317 ZFYVE19Q96K21 471 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 QKIQ96PU8 341 aaKnown RBP eCLIP8.17□□□□□ -1.1
COPS3-215ENST00000578317 KRT12Q99456 494 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 VAT1Q99536 393 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 LGMNQ99538 433 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 KXD1Q9BQD3 176 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 GSX2Q9BZM3 304 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 EBF3Q9H4W6 596 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 LATS2Q9NRM7 1088 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 AMACRQ9UHK6 382 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 TRHDEQ9UKU6 1024 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 CLEC4EQ9ULY5 219 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 H7C0C1 242 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 ATXN7O15265 892 aaPredicted RBP8.16□□□□□ -1.1
COPS3-215ENST00000578317 EFSO43281 561 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 TIMM44O43615 452 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 PRAMEF11O60813 436 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 MMP20O60882 483 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 ZMPSTE24O75844 475 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 ECEL1O95672 775 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 GAS8O95995 478 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 GLULP15104 373 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 TARSP26639 723 aaKnown RBP8.16□□□□□ -1.1
COPS3-215ENST00000578317 RBL1P28749 1068 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 GJA4P35212 333 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 ACVRL1P37023 503 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 ATP5OP48047 213 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 RENBPP51606 427 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 IFI35P80217 286 aaPredicted RBP8.16□□□□□ -1.1
COPS3-215ENST00000578317 DR1Q01658 176 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 LMAN2Q12907 356 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 SNX1Q13596 522 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 PWP1Q13610 501 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 ITPRIPL2Q3MIP1 535 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 TEX44Q53QW1 395 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 PEAR1Q5VY43 1037 aaPredicted RBP8.16□□□□□ -1.1
COPS3-215ENST00000578317 RNF219Q5W0B1 726 aaPredicted RBP8.16□□□□□ -1.1
COPS3-215ENST00000578317 HEATR6Q6AI08 1181 aaKnown RBP8.16□□□□□ -1.1
COPS3-215ENST00000578317 ADHFE1Q8IWW8 467 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 CCDC13Q8IYE1 715 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 ATPAF2Q8N5M1 289 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 DCAF4L2Q8NA75 395 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 NOA1Q8NC60 698 aaKnown RBP8.16□□□□□ -1.1
COPS3-215ENST00000578317 CCNYQ8ND76 341 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 CCHCR1Q8TD31 782 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 ATXN2LQ8WWM7 1075 aaKnown RBP8.16□□□□□ -1.1
COPS3-215ENST00000578317 CASKIN2Q8WXE0 1202 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 RSAD2Q8WXG1 361 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 DNASE1L2Q92874 299 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 TTC17Q96AE7 1141 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 IL12RB2Q99665 862 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 TMEM121Q9BTD3 319 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 BRD9Q9H8M2 597 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 PDFQ9HBH1 243 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 PRDM6Q9NQX0 595 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 PLK2Q9NYY3 685 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 DEC1Q9P2X7 70 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 PPM1HQ9ULR3 514 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 HPCAL4Q9UM19 191 aa8.16□□□□□ -1.1
COPS3-215ENST00000578317 MYO16Q9Y6X6 1858 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.15□□□□□ -1.1
COPS3-215ENST00000578317 J3KR12 359 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 DFFAO00273 331 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 KCNN4O15554 427 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 TULP3O75386 442 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 MAP3K6O95382 1288 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 PABPC1P11940 636 aaKnown RBP8.15□□□□□ -1.1
COPS3-215ENST00000578317 CCNB1P14635 433 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 IL9P15248 144 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 CSKP41240 450 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 GEMIN4P57678 1058 aaKnown RBP8.15□□□□□ -1.1
COPS3-215ENST00000578317 PFKPQ01813 784 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 TFF2Q03403 129 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 SULT2A1Q06520 285 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 C2orf54Q08AI8 447 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 AP1B1Q10567 949 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 WASHC5Q12768 1159 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 SFSWAPQ12872 951 aaKnown RBP8.15□□□□□ -1.1
COPS3-215ENST00000578317 TDGQ13569 410 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 P3H1Q32P28 736 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 PLEKHG6Q3KR16 790 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 ZNF787Q6DD87 383 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 IL31Q6EBC2 164 aa8.15□□□□□ -1.1
COPS3-215ENST00000578317 RETSATQ6NUM9 610 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms