RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 DOLKQ9UPQ8 538 aa13.61□□□□□ -0.23
COPS3-214ENST00000577246 WASF2Q9Y6W5 498 aa13.61□□□□□ -0.23
COPS3-214ENST00000577246 BICDL2A1A5D9 508 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 ILVBLA1L0T0 632 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 TERTO14746 1132 aaKnown RBP13.6□□□□□ -0.23
COPS3-214ENST00000577246 RAD51BO15315 384 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 GRAP2O75791 330 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 CNTN5O94779 1100 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 F9P00740 461 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 NTRK1P04629 796 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 SLC5A2P31639 672 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 GGCXP38435 758 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 BLKP51451 505 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 DNA2P51530 1060 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 ADKP55263 362 aaKnown RBP13.6□□□□□ -0.23
COPS3-214ENST00000577246 YPEL5P62699 121 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 EIF2B5Q13144 721 aaKnown RBP13.6□□□□□ -0.23
COPS3-214ENST00000577246 ALFQ53S48 1182 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 CARD16Q5EG05 197 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 FOXR2Q6PJQ5 311 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 ZNF574Q6ZN55 896 aaPredicted RBP13.6□□□□□ -0.23
COPS3-214ENST00000577246 RAB11FIP2Q7L804 512 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 SLC26A9Q7LBE3 791 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 ZDHHC17Q8IUH5 632 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 SLC35F3Q8IY50 421 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 PHACTR4Q8IZ21 702 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 FSTL5Q8N475 847 aaPredicted RBP13.6□□□□□ -0.23
COPS3-214ENST00000577246 ARL10Q8N8L6 244 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 EXD3Q8N9H8 876 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 OR6C4Q8NGE1 309 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 C1orf74Q96LT6 269 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 TMEM74Q96NL1 305 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 GFM1Q96RP9 751 aaKnown RBP13.6□□□□□ -0.23
COPS3-214ENST00000577246 CPXM1Q96SM3 734 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 KLF6Q99612 283 aaPredicted RBP13.6□□□□□ -0.23
COPS3-214ENST00000577246 TKTL2Q9H0I9 626 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 SYNCQ9H7C4 482 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 EPB41L5Q9HCM4 733 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 ARHGEF38Q9NXL2 777 aa13.6□□□□□ -0.23
COPS3-214ENST00000577246 A0A0D9SEW6 157 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 CXorf51AA0A1B0GTR3 108 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 IGLON5A6NGN9 336 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 DRGXA6NNA5 263 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 NTN3O00634 580 aaPredicted RBP13.59□□□□□ -0.23
COPS3-214ENST00000577246 ENDOD1O94919 500 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 AFPP02771 609 aaKnown RBP13.59□□□□□ -0.23
COPS3-214ENST00000577246 ALPIP09923 528 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 JMJD7P0C870 316 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 LIPCP11150 499 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 ETFBP38117 255 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 CCNHP51946 323 aaPredicted RBP13.59□□□□□ -0.23
COPS3-214ENST00000577246 PDX1P52945 283 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 GEMIN4P57678 1058 aaKnown RBP13.59□□□□□ -0.23
COPS3-214ENST00000577246 ELOCQ15369 112 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 FAXCQ5TGI0 409 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 SMYD5Q6GMV2 418 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 LVRNQ6Q4G3 990 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 OLFML1Q6UWY5 402 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 FAM183BPQ6ZVS7 135 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 PARS2Q7L3T8 475 aaKnown RBP13.59□□□□□ -0.23
COPS3-214ENST00000577246 TFAP2DQ7Z6R9 452 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 PLPP6Q8IY26 295 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 SDR16C5Q8N3Y7 309 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 ZNF397Q8NF99 534 aaPredicted RBP13.59□□□□□ -0.23
COPS3-214ENST00000577246 SPATA20Q8TB22 786 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 TMEM159Q96B96 161 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 SEMA3CQ99985 751 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 SPON2Q9BUD6 331 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 LRRC61Q9BV99 259 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 TRIM4Q9C037 500 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 ZDHHC6Q9H6R6 413 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 CAAP1Q9H8G2 361 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 ATP13A1Q9HD20 1204 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 SEPT3Q9UH03 358 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 PCDHB11Q9Y5F2 797 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.59□□□□□ -0.23
COPS3-214ENST00000577246 HECTD1Q9ULT8 2610 aa13.59□□□□□ -0.23
COPS3-214ENST00000577246 PMS2P1A4D2B8 440 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 GOLGA6L4A6NEF3 574 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 D6RAR5 112 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 NVLO15381 856 aaKnown RBP13.58□□□□□ -0.24
COPS3-214ENST00000577246 YY2O15391 372 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 SPINT1O43278 529 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 EFSO43281 561 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 GCATO75600 419 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 KRT10P13645 584 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 UGT1A5P35504 534 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 USP8P40818 1118 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 CXCR3P49682 368 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 SLC6A3Q01959 620 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 PPARDQ03181 441 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 DRAP1Q14919 205 aaPredicted RBP13.58□□□□□ -0.24
COPS3-214ENST00000577246 LINC00303Q3SY05 128 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 ZNF805Q5CZA5 627 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 MACC1Q6ZN28 852 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 TRIM59Q8IWR1 403 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 RBFAQ8N0V3 343 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 C1orf131Q8NDD1 294 aaKnown RBP13.58□□□□□ -0.24
COPS3-214ENST00000577246 EXTL1Q92935 676 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 ISG20Q96AZ6 181 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms