RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 CDH22Q9UJ99 828 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 FBXO4Q9UKT5 387 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 PCDHA12Q9UN75 941 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 CARD8Q9Y2G2 431 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 PAM16Q9Y3D7 125 aa2.69□□□□□ -1.98
COPS3-213ENST00000577210 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.69□□□□□ -1.98
COPS3-213ENST00000577210 TDRD9Q8NDG6 1382 aaKnown RBP2.69□□□□□ -1.98
COPS3-213ENST00000577210 TEX13CA0A0J9YWL9 993 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 A0A1W2PPH5 198 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 TYW5A2RUC4 315 aaKnown RBP2.68□□□□□ -1.98
COPS3-213ENST00000577210 LRRC53A6NM62 1247 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 MS4A18H0YCH9 400 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 VWA5AO00534 786 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 SPTLC2O15270 562 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 OAZ2O95190 189 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 MBD4O95243 580 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 DDX58O95786 925 aaKnown RBP2.68□□□□□ -1.98
COPS3-213ENST00000577210 TOP3BO95985 862 aaKnown RBP2.68□□□□□ -1.98
COPS3-213ENST00000577210 ADAP00813 363 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 LYL1P12980 280 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 SCP2P22307 547 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 GPTP24298 496 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 CHATP28329 748 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 TNFSF8P32971 234 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 BSGP35613 385 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 AVPR1AP37288 418 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 LIFRP42702 1097 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 TUBP50607 506 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 RARSP54136 660 aaKnown RBP2.68□□□□□ -1.98
COPS3-213ENST00000577210 RAD23BP54727 409 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 CASP6P55212 293 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 CDH12P55289 794 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 ZP1P60852 638 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 RPL7AP62424 266 aaKnown RBP2.68□□□□□ -1.98
COPS3-213ENST00000577210 ECT2LQ008S8 904 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 CYP4A11Q02928 519 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 ZBTB16Q05516 673 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 DSC1Q08554 894 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 NEXNQ0ZGT2 675 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 GALNT2Q10471 571 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 RUNX2Q13950 521 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 PTGR1Q14914 329 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 VEPH1Q14D04 833 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 PRICKLE4Q2TBC4 344 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 PLEKHO1Q53GL0 409 aaPredicted RBP2.68□□□□□ -1.98
COPS3-213ENST00000577210 FAM69AQ5T7M9 428 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 SERTAD4-AS1Q5TG53 156 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
COPS3-213ENST00000577210 TMEM81Q6P7N7 255 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 SLC2A7Q6PXP3 512 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 ATF7IPQ6VMQ6 1270 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 C4orf50Q6ZRC1 276 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 FAM83HQ6ZRV2 1179 aaPredicted RBP2.68□□□□□ -1.98
COPS3-213ENST00000577210 RNF144BQ7Z419 303 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 FAM160B2Q86V87 743 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 TMEM217Q8N7C4 229 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 MCPH1Q8NEM0 835 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 CMASQ8NFW8 434 aaPredicted RBP2.68□□□□□ -1.98
COPS3-213ENST00000577210 ETNPPLQ8TBG4 499 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 RUFY2Q8WXA3 655 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 KAT2AQ92830 837 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 FAM149B1Q96BN6 582 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 GFM1Q96RP9 751 aaKnown RBP2.68□□□□□ -1.98
COPS3-213ENST00000577210 SF3B5Q9BWJ5 86 aaKnown RBP2.68□□□□□ -1.98
COPS3-213ENST00000577210 PHF7Q9BWX1 381 aaPredicted RBP2.68□□□□□ -1.98
COPS3-213ENST00000577210 C1QTNF7Q9BXJ2 289 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 LMAN2LQ9H0V9 348 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 CDT1Q9H211 546 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 KLHL31Q9H511 634 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 KRCC1Q9NPI7 259 aaPredicted RBP2.68□□□□□ -1.98
COPS3-213ENST00000577210 DIAPH3Q9NSV4 1193 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 OLA1Q9NTK5 396 aaKnown RBP2.68□□□□□ -1.98
COPS3-213ENST00000577210 KIAA1456Q9P272 454 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 PEMTQ9UBM1 199 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 SWAP70Q9UH65 585 aa2.68□□□□□ -1.98
COPS3-213ENST00000577210 A0A087X0M5 115 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 A0A1B0GX30 115 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 WDR91A4D1P6 747 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 DNAJC9-AS1A6NH13 148 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 B4E171 279 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 EIF3CLB5ME19 914 aaKnown RBP2.67□□□□□ -1.98
COPS3-213ENST00000577210 ZNF814B7Z6K7 855 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 USP17L23D6RBM5 183 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 STMND1H3BQB6 276 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 HSPB6O14558 160 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 ASAP2O43150 1006 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 BAIAP3O94812 1187 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 NDUFB4O95168 129 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 RTN3O95197 1032 aaPredicted RBP2.67□□□□□ -1.98
COPS3-213ENST00000577210 SCGB1D1O95968 90 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 F9P00740 461 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 LDHCP07864 332 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 GALTP07902 379 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 ARSBP15848 533 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 DDX5P17844 614 aaKnown RBP2.67□□□□□ -1.98
COPS3-213ENST00000577210 CDH2P19022 906 aaPredicted RBP2.67□□□□□ -1.98
COPS3-213ENST00000577210 ABCD3P28288 659 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 HOXD9P28356 352 aaPredicted RBP2.67□□□□□ -1.98
COPS3-213ENST00000577210 MAN1A1P33908 653 aa2.67□□□□□ -1.98
COPS3-213ENST00000577210 CPOXP36551 454 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms