RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 NPC1O15118 1278 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 BCAT2O15382 392 aaPredicted RBP6.44□□□□□ -1.38
NUP88-212ENST00000576708 TIMM44O43615 452 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 ACSL4O60488 711 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 FSBPO95073 299 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 MOCS2O96007 188 aaPredicted RBP6.44□□□□□ -1.38
NUP88-212ENST00000576708 IGLV3-19P01714 112 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 LTFP02788 710 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 PAEPP09466 180 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 FTH1P19P0C7X4 201 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 OXTRP30559 389 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 KIR3DL1P43629 444 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 ZNF132P52740 706 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 PITX1P78337 314 aaPredicted RBP6.44□□□□□ -1.38
NUP88-212ENST00000576708 BNIP3Q12983 259 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 MORC3Q14149 939 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 TAF5Q15542 800 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 KIF19Q2TAC6 998 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 HLA-BQ31612 363 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 FSCBQ5H9T9 825 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 KCNT1Q5JUK3 1230 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 SYPL2Q5VXT5 272 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 GJB7Q6PEY0 223 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 RABEPKQ7Z6M1 372 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 SLCO6A1Q86UG4 719 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 TAC4Q86UU9 113 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 DHX40Q8IX18 779 aaKnown RBP6.44□□□□□ -1.38
NUP88-212ENST00000576708 AHI1Q8N157 1196 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 SCML4Q8N228 414 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 CARNMT1Q8N4J0 409 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.44□□□□□ -1.38
NUP88-212ENST00000576708 CADM4Q8NFZ8 388 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 DQX1Q8TE96 717 aaKnown RBP6.44□□□□□ -1.38
NUP88-212ENST00000576708 WFIKKN2Q8TEU8 576 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 SETD7Q8WTS6 366 aaKnown RBP6.44□□□□□ -1.38
NUP88-212ENST00000576708 IRGQQ8WZA9 623 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 BIRC7Q96CA5 298 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 MRGPRX3Q96LB0 322 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 DHRS1Q96LJ7 313 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 TIGD1Q96MW7 591 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 ASPNQ9BXN1 380 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 INTS2Q9H0H0 1204 aaKnown RBP6.44□□□□□ -1.38
NUP88-212ENST00000576708 GAREM1Q9H706 876 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 METTL14Q9HCE5 456 aaKnown RBP6.44□□□□□ -1.38
NUP88-212ENST00000576708 ST7Q9NRC1 585 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 PLA2G4CQ9UP65 541 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 BTBD3Q9Y2F9 522 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 MSRB2Q9Y3D2 182 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 NEUROG3Q9Y4Z2 214 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 SNX11Q9Y5W9 270 aa6.44□□□□□ -1.38
NUP88-212ENST00000576708 PI4KAP42356 2102 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 CFAP47Q6ZTR5 3102 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 FAM170AA1A519 330 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 FAM47DPA6NHR8 397 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 TTC34A8MYJ7 566 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 PMM2O15305 246 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 CBFA2T3O75081 653 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 LETM1O95202 739 aaPredicted RBP6.43□□□□□ -1.38
NUP88-212ENST00000576708 SEMA4FO95754 770 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 LATS1O95835 1130 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 DNTTP04053 509 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 DLDP09622 509 aaKnown RBP6.43□□□□□ -1.38
NUP88-212ENST00000576708 ATXN1LP0C7T5 689 aaKnown RBP6.43□□□□□ -1.38
NUP88-212ENST00000576708 KRT5P13647 590 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 POLR2EP19388 210 aaKnown RBP6.43□□□□□ -1.38
NUP88-212ENST00000576708 SLC9A1P19634 815 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 CSKP41240 450 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 MATKP42679 507 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 GPD2P43304 727 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 SLC11A2P49281 568 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 RNF4P78317 190 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 IL9RQ01113 521 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 SLC14A1Q13336 389 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 STIM1Q13586 685 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 DCAF6Q58WW2 860 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 PRAMEF14Q5SWL7 426 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 RAP1GAP2Q684P5 730 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 NUGGCQ68CJ6 796 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 C22orf34Q6ZV56 151 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 CIR1Q86X95 450 aaPredicted RBP6.43□□□□□ -1.38
NUP88-212ENST00000576708 MFN1Q8IWA4 741 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 TRIM59Q8IWR1 403 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 UNC45BQ8IWX7 931 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 APCDD1Q8J025 514 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 LGI2Q8N0V4 545 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 C19orf47Q8N9M1 422 aaKnown RBP6.43□□□□□ -1.38
NUP88-212ENST00000576708 HJURPQ8NCD3 748 aaPredicted RBP6.43□□□□□ -1.38
NUP88-212ENST00000576708 GANCQ8TET4 914 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 SREK1Q8WXA9 508 aaKnown RBP6.43□□□□□ -1.38
NUP88-212ENST00000576708 UBE2FQ969M7 185 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 FAM149B1Q96BN6 582 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 SLC39A13Q96H72 371 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 COX4I2Q96KJ9 171 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 HSFY1Q96LI6 401 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 MED15Q96RN5 788 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 ORAI3Q9BRQ5 295 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 CRACR2AQ9BSW2 395 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 GTPBP4Q9BZE4 634 aaKnown RBP6.43□□□□□ -1.38
NUP88-212ENST00000576708 EBF2Q9HAK2 575 aa6.43□□□□□ -1.38
NUP88-212ENST00000576708 TM9SF3Q9HD45 589 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms