RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 ITGAVP06756 1048 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 ADRB3P13945 408 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 EPHA8P29322 1005 aaPredicted RBP12.09□□□□□ -0.47
LITAF-219ENST00000576334 GRK6P43250 576 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 SLC20A2Q08357 652 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 KLHL30Q0D2K2 578 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 HNRNPDQ14103 355 aaKnown RBP12.09□□□□□ -0.47
LITAF-219ENST00000576334 STAT4Q14765 748 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 SUZ12Q15022 739 aaKnown RBP12.09□□□□□ -0.47
LITAF-219ENST00000576334 TMEM259Q4ZIN3 620 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 SETMARQ53H47 684 aaPredicted RBP12.09□□□□□ -0.47
LITAF-219ENST00000576334 ZNF542PQ5EBM4 170 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 KANSL1Q7Z3B3 1105 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 HORMAD1Q86X24 394 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 SLC22A18ASQ8N1D0 253 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 MFSD2AQ8NA29 543 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 TMEM145Q8NBT3 493 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 OR13H1Q8NG92 308 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 KCTD15Q96SI1 283 aaPredicted RBP12.09□□□□□ -0.47
LITAF-219ENST00000576334 SNRNP25Q9BV90 132 aaKnown RBP12.09□□□□□ -0.47
LITAF-219ENST00000576334 CEP44Q9C0F1 390 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 DHX35Q9H5Z1 703 aaKnown RBP12.09□□□□□ -0.47
LITAF-219ENST00000576334 DYRK4Q9NR20 520 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 TMEM51Q9NW97 253 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 CNOT8Q9UFF9 292 aaKnown RBP12.09□□□□□ -0.47
LITAF-219ENST00000576334 MYO6Q9UM54 1294 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 AP4E1Q9UPM8 1137 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 MFHAS1Q9Y4C4 1052 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 FADS3Q9Y5Q0 445 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 ANKRD62A6NC57 917 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 POM121BA6NF01 834 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 C16orf96A6NNT2 1141 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 PRAMEF26H0Y7S4 382 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 TAF4O00268 1085 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 DKK1O94907 266 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 CCDC172P0C7W6 258 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 THEGLP0DJG4 465 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 ITGB7P26010 798 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 PBX1P40424 430 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 PRKCIP41743 596 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 NEK3P51956 506 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 SERINC3Q13530 473 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 CYTH1Q15438 398 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 KLHL40Q2TBA0 621 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 MYLK3Q32MK0 819 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 TPRG1LQ5T0D9 272 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 HGSNATQ68CP4 663 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 FBXL19Q6PCT2 694 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 DHRS13Q6UX07 377 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 GCNT7Q6ZNI0 430 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 ARHGAP36Q6ZRI8 547 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 OR2AP1Q8NGE2 309 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 ZNF653Q96CK0 615 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 KLHDC7BQ96G42 594 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 BTBD6Q96KE9 485 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 BMFQ96LC9 184 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 KLHL32Q96NJ5 620 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 CDC6Q99741 560 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 CALN1Q9BXU9 219 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 SLC39A8Q9C0K1 460 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 PARVAQ9NVD7 372 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 UCKL1Q9NWZ5 548 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 FTSJ1Q9UET6 329 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 HPCAL4Q9UM19 191 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 DMTF1Q9Y222 760 aa12.08□□□□□ -0.48
LITAF-219ENST00000576334 APOBEC2Q9Y235 224 aaKnown RBP12.08□□□□□ -0.48
LITAF-219ENST00000576334 FAM221BA6H8Z2 402 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 IGLON5A6NGN9 336 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 TNFSF14O43557 240 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 TRIM16O95361 564 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 PIGNO95427 931 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 LDOC1O95751 146 aaPredicted RBP12.07□□□□□ -0.48
LITAF-219ENST00000576334 CAPNS1P04632 268 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 MYF5P13349 255 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 HNRNPA2B1P22626 353 aaKnown RBP12.07□□□□□ -0.48
LITAF-219ENST00000576334 IL1R2P27930 398 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 MIPP30301 263 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 ETFBP38117 255 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 RGRP47804 291 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 TPI1P60174 286 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 SEMG2Q02383 582 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 LRRK1Q38SD2 2015 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 SLC45A4Q5BKX6 768 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 TXNRD3NBQ6F5E7 133 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 CCNI2Q6ZMN8 369 aaPredicted RBP12.07□□□□□ -0.48
LITAF-219ENST00000576334 CPNE8Q86YQ8 564 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 SLC25A45Q8N413 288 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 NPWQ8N729 165 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 KDF1Q8NAX2 398 aaPredicted RBP12.07□□□□□ -0.48
LITAF-219ENST00000576334 ZCCHC14Q8WYQ9 949 aaKnown RBP12.07□□□□□ -0.48
LITAF-219ENST00000576334 ISG20Q96AZ6 181 aaKnown RBP12.07□□□□□ -0.48
LITAF-219ENST00000576334 SKA1Q96BD8 255 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 PPP1R16AQ96I34 528 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 VCPIP1Q96JH7 1222 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 CNDP2Q96KP4 475 aaKnown RBP12.07□□□□□ -0.48
LITAF-219ENST00000576334 EPAS1Q99814 870 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 SLC17A9Q9BYT1 436 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 LRRC19Q9H756 370 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 IFNKQ9P0W0 207 aa12.07□□□□□ -0.48
LITAF-219ENST00000576334 LHX3Q9UBR4 397 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms