RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 TRIM62Q9BVG3 475 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 SIK2Q9H0K1 926 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 XPR1Q9UBH6 696 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 CLEC11AQ9Y240 323 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 IQCA1LA6NCM1 817 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 M0QZ92 97 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 AIM2O14862 343 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 NPHS1O60500 1241 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 RNASEH1O60930 286 aaKnown RBP9.06□□□□□ -0.96
NCBP3-204ENST00000574911 SMIM24O75264 130 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 UQCRBP14927 111 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 PEX2P28328 305 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 PPARGP37231 505 aaPredicted RBP9.06□□□□□ -0.96
NCBP3-204ENST00000574911 NUDT2P50583 147 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 CTBP1Q13363 440 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 CYLC2Q14093 348 aaPredicted RBP9.06□□□□□ -0.96
NCBP3-204ENST00000574911 ZNF460Q14592 562 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 AFMIDQ63HM1 303 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 METTL23Q86XA0 190 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 DSELQ8IZU8 1212 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 KYQ8NBH2 561 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 C2CD4AQ8NCU7 369 aaPredicted RBP9.06□□□□□ -0.96
NCBP3-204ENST00000574911 HIPK4Q8NE63 616 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 NXNL1Q96CM4 212 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 PPP1R2P1Q96PQ5 205 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 TSC22D3Q99576 134 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 DDX50Q9BQ39 737 aaKnown RBP9.06□□□□□ -0.96
NCBP3-204ENST00000574911 FTHL17Q9BXU8 183 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 NUF2Q9BZD4 464 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 UBE2OQ9C0C9 1292 aaKnown RBP9.06□□□□□ -0.96
NCBP3-204ENST00000574911 SENP6Q9GZR1 1112 aaPredicted RBP9.06□□□□□ -0.96
NCBP3-204ENST00000574911 FAM192AQ9GZU8 254 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 CATSPERBQ9H7T0 1116 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 SPON1Q9HCB6 807 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 TREX1Q9NSU2 369 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.06□□□□□ -0.96
NCBP3-204ENST00000574911 SLC2A6Q9UGQ3 507 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 CDYLQ9Y232 598 aa9.06□□□□□ -0.96
NCBP3-204ENST00000574911 A0A087X1B8 175 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 MYADML2A6NDP7 307 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 ENO4A6NNW6 628 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 PAGE1O75459 146 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 CHRNA1P02708 482 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 HLA-DQB2P05538 268 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 ZCCHC18P0CG32 403 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 STMN1P16949 149 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 SLC1A2P43004 574 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 BRCC3P46736 316 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 MGAT3Q09327 533 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 ZNF423Q2M1K9 1284 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 OGFRL1Q5TC84 451 aaPredicted RBP9.05□□□□□ -0.96
NCBP3-204ENST00000574911 NAIF1Q69YI7 327 aaPredicted RBP9.05□□□□□ -0.96
NCBP3-204ENST00000574911 LRRTM3Q86VH5 581 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 SCAMP5Q8TAC9 235 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 ZNF483Q8TF39 744 aaPredicted RBP9.05□□□□□ -0.96
NCBP3-204ENST00000574911 PPP1R36Q96LQ0 422 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 TMEM209Q96SK2 561 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 SERPINI1Q99574 410 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 PIDD1Q9HB75 910 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 ENTPD7Q9NQZ7 604 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 JUNP05412 331 aaKnown RBP9.05□□□□□ -0.96
NCBP3-204ENST00000574911 YY1P25490 414 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 CD151P48509 253 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 AQP4P55087 323 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 TAS2R39P59534 338 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 DNAJB13P59910 316 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 PIGGQ5H8A4 983 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 KIAA0930Q6ICG6 404 aaPredicted RBP9.05□□□□□ -0.96
NCBP3-204ENST00000574911 RANBP10Q6VN20 620 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 KDM1BQ8NB78 822 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 OR10T2Q8NGX3 314 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 MAELQ96JY0 434 aaKnown RBP9.05□□□□□ -0.96
NCBP3-204ENST00000574911 MRGPRX2Q96LB1 330 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 CATSPER2Q96P56 530 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 MRPL46Q9H2W6 279 aaKnown RBP9.05□□□□□ -0.96
NCBP3-204ENST00000574911 SMOC2Q9H3U7 446 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 ABCC13Q9NSE7 274 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 SPATS2LQ9NUQ6 558 aaKnown RBP9.05□□□□□ -0.96
NCBP3-204ENST00000574911 NDFIP2Q9NV92 336 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 RBM22Q9NW64 420 aaKnown RBP eCLIP9.05□□□□□ -0.96
NCBP3-204ENST00000574911 G3BP2Q9UN86 482 aaKnown RBP9.05□□□□□ -0.96
NCBP3-204ENST00000574911 PSMD13Q9UNM6 376 aa9.05□□□□□ -0.96
NCBP3-204ENST00000574911 M0QZQ0 153 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 TADA2AO75478 443 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 SNUPNO95149 360 aaKnown RBP9.04□□□□□ -0.96
NCBP3-204ENST00000574911 VCLP18206 1134 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 PAMP19021 973 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 TRIP10Q15642 601 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 CNGA3Q16281 694 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 LRRC36Q1X8D7 754 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 MAP3K21Q5TCX8 1036 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 TMEM198Q66K66 360 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 GDF6Q6KF10 455 aaPredicted RBP9.04□□□□□ -0.96
NCBP3-204ENST00000574911 TIGD7Q6NT04 549 aaPredicted RBP9.04□□□□□ -0.96
NCBP3-204ENST00000574911 PGAM4Q8N0Y7 254 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 CASP10Q92851 521 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 RCN3Q96D15 328 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 ELMO2Q96JJ3 720 aa9.04□□□□□ -0.96
NCBP3-204ENST00000574911 FCRL2Q96LA5 508 aaPredicted RBP9.04□□□□□ -0.96
NCBP3-204ENST00000574911 CDRT15Q96T59 188 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms