RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 TGIF1Q15583 401 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 MEA1Q16626 185 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 LINGO4Q6UY18 593 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 DPY19L3Q6ZPD9 716 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 TMEM110Q86TL2 294 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 SETD3Q86TU7 594 aaPredicted RBP12.16□□□□□ -0.46
CTNS-208ENST00000574218 RYBPQ8N488 228 aaPredicted RBP12.16□□□□□ -0.46
CTNS-208ENST00000574218 PCDH20Q8N6Y1 951 aaKnown RBP12.16□□□□□ -0.46
CTNS-208ENST00000574218 RAB7BQ96AH8 199 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 ARHGEF26Q96DR7 871 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 PPP1R13BQ96KQ4 1090 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 TBATAQ96M53 351 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 SPON2Q9BUD6 331 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 CPEB1Q9BZB8 566 aaKnown RBP12.16□□□□□ -0.46
CTNS-208ENST00000574218 ZDHHC6Q9H6R6 413 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 KLF15Q9UIH9 416 aa12.16□□□□□ -0.46
CTNS-208ENST00000574218 IGLON5A6NGN9 336 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 D6RAR5 112 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 NTN3O00634 580 aaPredicted RBP12.15□□□□□ -0.46
CTNS-208ENST00000574218 PAGE1O75459 146 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 RPLP0P05388 317 aaKnown RBP12.15□□□□□ -0.46
CTNS-208ENST00000574218 ALPIP09923 528 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 ITGB6P18564 788 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 GNA15P30679 374 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 PRCPP42785 496 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 PDX1P52945 283 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 YPEL5P62699 121 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 PPARDQ03181 441 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 PDCLQ13371 301 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 STIM1Q13586 685 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 UBAP2LQ14157 1087 aaKnown RBP12.15□□□□□ -0.46
CTNS-208ENST00000574218 FGL2Q14314 439 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 ELOCQ15369 112 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 ANKRD40Q6AI12 368 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 HSCBQ8IWL3 235 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 SDR16C5Q8N3Y7 309 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 FSTL5Q8N475 847 aaPredicted RBP12.15□□□□□ -0.46
CTNS-208ENST00000574218 ARL10Q8N8L6 244 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 OR6C4Q8NGE1 309 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 CCDC74AQ96AQ1 378 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 PSMB7Q99436 277 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 LRRC61Q9BV99 259 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 FOXP3Q9BZS1 431 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 CEP44Q9C0F1 390 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 SLC25A18Q9H1K4 315 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 ASNSD1Q9NWL6 643 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 SIRPGQ9P1W8 387 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 ACSL6Q9UKU0 697 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 PAXBP1Q9Y5B6 917 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 PCDHGA4Q9Y5G9 962 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 WASF2Q9Y6W5 498 aa12.15□□□□□ -0.46
CTNS-208ENST00000574218 ZFC3H1O60293 1989 aaKnown RBP12.14□□□□□ -0.47
CTNS-208ENST00000574218 LRP4O75096 1905 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 PMM2O15305 246 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 NVLO15381 856 aaKnown RBP12.14□□□□□ -0.47
CTNS-208ENST00000574218 YY2O15391 372 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 P4HA2O15460 535 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 SPINT1O43278 529 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 GCATO75600 419 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 GRAP2O75791 330 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 CNTN5O94779 1100 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 GP1BBP13224 206 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 HGFP14210 728 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 TSHRP16473 764 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 OR1E1P30953 314 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 CCNHP51946 323 aaPredicted RBP12.14□□□□□ -0.47
CTNS-208ENST00000574218 PFN3P60673 137 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 SLC20A2Q08357 652 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 EIF4EBP2Q13542 120 aaPredicted RBP12.14□□□□□ -0.47
CTNS-208ENST00000574218 TAF5Q15542 800 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 TBR1Q16650 682 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 CARD16Q5EG05 197 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 ZNF658Q5TYW1 1059 aaPredicted RBP12.14□□□□□ -0.47
CTNS-208ENST00000574218 MACC1Q6ZN28 852 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 PARS2Q7L3T8 475 aaKnown RBP12.14□□□□□ -0.47
CTNS-208ENST00000574218 TFAP2DQ7Z6R9 452 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 B3GNT8Q7Z7M8 397 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 VASH2Q86V25 355 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 VPS36Q86VN1 386 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 GKN2Q86XP6 184 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 ARHGEF19Q8IW93 802 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 ZNF606Q8WXB4 792 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 ASB12Q8WXK4 309 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 TMEM159Q96B96 161 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 SLC2A13Q96QE2 648 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 KLF6Q99612 283 aaPredicted RBP12.14□□□□□ -0.47
CTNS-208ENST00000574218 C1QTNF2Q9BXJ5 285 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 GTPBP4Q9BZE4 634 aaKnown RBP12.14□□□□□ -0.47
CTNS-208ENST00000574218 TCEAL2Q9H3H9 227 aaPredicted RBP12.14□□□□□ -0.47
CTNS-208ENST00000574218 WDCPQ9H6R7 721 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 SYNCQ9H7C4 482 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 ATP13A1Q9HD20 1204 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 AKAP7Q9P0M2 348 aaPredicted RBP12.14□□□□□ -0.47
CTNS-208ENST00000574218 LOXL2Q9Y4K0 774 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 LRRK1Q38SD2 2015 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 LRRK2Q5S007 2527 aa12.14□□□□□ -0.47
CTNS-208ENST00000574218 ANKRD36A6QL64 1941 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 FAM237AA0A1B0GTK4 181 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 TOR1BO14657 336 aa12.13□□□□□ -0.47
CTNS-208ENST00000574218 PSMA7O14818 248 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms