RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 ZSCAN23Q3MJ62 389 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 TDRD12Q587J7 1177 aaKnown RBP10.17□□□□□ -0.78
RPA1-206ENST00000573994 ATXN7L2Q5T6C5 722 aaPredicted RBP10.17□□□□□ -0.78
RPA1-206ENST00000573994 SEL1L3Q68CR1 1132 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 NAPEPLDQ6IQ20 393 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 BRICD5Q6PL45 260 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 PARS2Q7L3T8 475 aaKnown RBP10.17□□□□□ -0.78
RPA1-206ENST00000573994 TRIM69Q86WT6 500 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 GATAD2AQ86YP4 633 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 CHCHD4Q8N4Q1 142 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 PCDH20Q8N6Y1 951 aaKnown RBP10.17□□□□□ -0.78
RPA1-206ENST00000573994 RTL3Q8N8U3 475 aaKnown RBP10.17□□□□□ -0.78
RPA1-206ENST00000573994 PNPLA1Q8N8W4 532 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 SKA1Q96BD8 255 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 HMCESQ96FZ2 354 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 VCPIP1Q96JH7 1222 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 PEBP4Q96S96 227 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 EDEM3Q9BZQ6 932 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 KLC2Q9H0B6 622 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 NOL6Q9H6R4 1146 aaKnown RBP10.17□□□□□ -0.78
RPA1-206ENST00000573994 PREBQ9HCU5 417 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 PARVAQ9NVD7 372 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 AIPL1Q9NZN9 384 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 MYO1AQ9UBC5 1043 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 CNOT8Q9UFF9 292 aaKnown RBP10.17□□□□□ -0.78
RPA1-206ENST00000573994 PCSK1NQ9UHG2 260 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 AP4E1Q9UPM8 1137 aa10.17□□□□□ -0.78
RPA1-206ENST00000573994 KNL1Q8NG31 2342 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 A0A1W2PQU0 124 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 C1QTNF9BB2RNN3 333 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 GOLGA6L19H0YKK7 550 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 SLC31A1O15431 190 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 FLRT2O43155 660 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 DFNA5O60443 496 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 TMCC1O94876 653 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 FTLP02792 175 aaPredicted RBP10.16□□□□□ -0.78
RPA1-206ENST00000573994 C1QTNF9P0C862 333 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 L1CAMP32004 1257 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 PRKCIP41743 596 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 AIF1P55008 147 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 UBASH3AP57075 661 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 NXPH1P58417 271 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 TPI1P60174 286 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 SETMARQ53H47 684 aaPredicted RBP10.16□□□□□ -0.78
RPA1-206ENST00000573994 CCDC157Q569K6 752 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 CARD16Q5EG05 197 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 LRRC73Q5JTD7 316 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 PLEKHA7Q6IQ23 1121 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 ERN2Q76MJ5 926 aaKnown RBP10.16□□□□□ -0.78
RPA1-206ENST00000573994 PRPF39Q86UA1 669 aaKnown RBP10.16□□□□□ -0.78
RPA1-206ENST00000573994 TMIEQ8NEW7 156 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 RHBDD1Q8TEB9 315 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 PPP1R16AQ96I34 528 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 CELF6Q96J87 481 aaKnown RBP10.16□□□□□ -0.78
RPA1-206ENST00000573994 KCTD15Q96SI1 283 aaPredicted RBP10.16□□□□□ -0.78
RPA1-206ENST00000573994 ELF4Q99607 663 aaPredicted RBP10.16□□□□□ -0.78
RPA1-206ENST00000573994 HEPHQ9BQS7 1158 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 MAGEH1Q9H213 219 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 DHX35Q9H5Z1 703 aaKnown RBP10.16□□□□□ -0.78
RPA1-206ENST00000573994 GDF3Q9NR23 364 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 DONSONQ9NYP3 566 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 ARHGAP20Q9P2F6 1191 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 HECAQ9UBI9 543 aaPredicted RBP10.16□□□□□ -0.78
RPA1-206ENST00000573994 HPCAL4Q9UM19 191 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 ITM2BQ9Y287 266 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 PCDHGB2Q9Y5G2 931 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 CACNA1BQ00975 2339 aa10.16□□□□□ -0.78
RPA1-206ENST00000573994 PLXNA2O75051 1894 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 A0A1B0GTQ1 180 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 FAM187AA6NFU0 413 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 RASA4BC9J798 803 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 TLR4O00206 839 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 KRIT1O00522 736 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 RASA4O43374 803 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 BUB1O43683 1085 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 PCDH8O95206 1070 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 UGT2B4P06133 528 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 ATXN1LP0C7T5 689 aaKnown RBP10.15□□□□□ -0.78
RPA1-206ENST00000573994 ADRB3P13945 408 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 ITGB7P26010 798 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 PBX1P40424 430 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 GRK6P43250 576 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 NEK3P51956 506 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 GEMIN4P57678 1058 aaKnown RBP10.15□□□□□ -0.78
RPA1-206ENST00000573994 SUZ12Q15022 739 aaKnown RBP10.15□□□□□ -0.78
RPA1-206ENST00000573994 SHBQ15464 509 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 ZNF284Q2VY69 593 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 SLC45A4Q5BKX6 768 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 UNQ6494/PRO21346Q6UXR6 183 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 HORMAD1Q86X24 394 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 SPATS2Q86XZ4 545 aaKnown RBP10.15□□□□□ -0.78
RPA1-206ENST00000573994 ARFGAP1Q8N6T3 406 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 BAHD1Q8TBE0 780 aaPredicted RBP10.15□□□□□ -0.78
RPA1-206ENST00000573994 CPLX3Q8WVH0 158 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 IQCDQ96DY2 449 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 EXOC2Q96KP1 924 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.15□□□□□ -0.78
RPA1-206ENST00000573994 SNRNP25Q9BV90 132 aaKnown RBP10.15□□□□□ -0.78
RPA1-206ENST00000573994 HDAC8Q9BY41 377 aa10.15□□□□□ -0.78
RPA1-206ENST00000573994 CATSPERBQ9H7T0 1116 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms