RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 STK40Q8N2I9 435 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 HTR3CQ8WXA8 447 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 GDAP1L1Q96MZ0 367 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 FERMT1Q9BQL6 677 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 TMEM121Q9BTD3 319 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 TM6SF2Q9BZW4 377 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 TNKS2Q9H2K2 1166 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 PDFQ9HBH1 243 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 USP29Q9HBJ7 922 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 RBM22Q9NW64 420 aaKnown RBP eCLIP13.1□□□□□ -0.317e-7■■□□□ 11.9
NPLOC4-214ENST00000573876 ZSCAN32Q9NX65 697 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 HCN4Q9Y3Q4 1203 aa13.1□□□□□ -0.31
NPLOC4-214ENST00000573876 SDK1Q7Z5N4 2213 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 SHROOM3Q8TF72 1996 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 GOLGA6L10A0A0M3HER8 536 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 C1QTNF3-AMACRE9PGA6 284 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 KCNN4O15554 427 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 IL1BP01584 269 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 PRNPP04156 253 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 VAV1P15498 845 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 NDUFV2P19404 249 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 STIP1P31948 543 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 CHRNA3P32297 505 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 COILP38432 576 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 HSPA9P38646 679 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 COPAP53621 1224 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 PTPN5P54829 565 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 ZBTB16Q05516 673 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 ITKQ08881 620 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 WHAMMP3Q1A5X7 153 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 TTC31Q49AM3 519 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 USP39Q53GS9 565 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 TEX44Q53QW1 395 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 WDR5BQ86VZ2 330 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 RASSF3Q86WH2 238 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 MMAAQ8IVH4 418 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 FAM71DQ8N9W8 422 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 MDGA1Q8NFP4 955 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 OR2AP1Q8NGE2 309 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 ATL2Q8NHH9 583 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 GANCQ8TET4 914 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 MAML1Q92585 1016 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 FATE1Q969F0 183 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 NKD2Q969F2 451 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 SPACA7Q96KW9 195 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 MRGPRX1Q96LB2 322 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 QKIQ96PU8 341 aaKnown RBP eCLIP13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 FAM129BQ96TA1 746 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 HEPHQ9BQS7 1158 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 CEP41Q9BYV8 373 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 MKRN2Q9H000 416 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 RSPH9Q9H1X1 276 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 CD248Q9HCU0 757 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 SCML1Q9UN30 329 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 MRFAP1Q9Y605 127 aa13.09□□□□□ -0.31
NPLOC4-214ENST00000573876 GON4LQ3T8J9 2241 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 MUC22E2RYF6 1773 aaPredicted RBP13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 MTSS1O43312 755 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 ZNF217O75362 1048 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 ZNF189O75820 626 aaPredicted RBP13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 POP4O95707 220 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 ADH1BP00325 375 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 ITGAVP06756 1048 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 TDGF1P13385 188 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 MMP13P45452 471 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 PSMD8P48556 350 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 CCNHP51946 323 aaPredicted RBP13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 RPS14P62263 151 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 CCDC15Q0P6D6 951 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 WASHC5Q12768 1159 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 OASLQ15646 514 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 CST6Q15828 149 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 CYP1B1Q16678 543 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 MYLK3Q32MK0 819 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 TTC27Q6P3X3 843 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 DRICH1Q6PGQ1 229 aaPredicted RBP13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 ZC3H14Q6PJT7 736 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 CCDC137Q6PK04 289 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 DPY19L3Q6ZPD9 716 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 GSTA5Q7RTV2 222 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 PID1Q7Z2X4 250 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 CACUL1Q86Y37 369 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 KLHL7Q8IXQ5 586 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 TEX26Q8N6G2 289 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 TSEN2Q8NCE0 465 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 SPATA4Q8NEY3 305 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 OR2A12Q8NGT7 310 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 LRIG1Q96JA1 1093 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 AGAP3Q96P47 875 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 PSKH2Q96QS6 385 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 IL12RB2Q99665 862 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 TPSD1Q9BZJ3 242 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 ZDHHC6Q9H6R6 413 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 NT5MQ9NPB1 228 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 DYRK4Q9NR20 520 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 IL36AQ9UHA7 158 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 FEZ2Q9UHY8 353 aaPredicted RBP13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 NCKAP1Q9Y2A7 1128 aa13.08□□□□□ -0.32
NPLOC4-214ENST00000573876 PCDHGA2Q9Y5H1 932 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms