RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 TRPC5OSA6NMA1 111 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 TRPA1O75762 1119 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 PGK1P00558 417 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 DARSP14868 501 aaKnown RBP15.84■□□□□ 0.13
NUP88-207ENST00000573584 DAOAP59103 153 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 POU6F1Q14863 301 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 PABPC1LQ4VXU2 614 aaKnown RBP15.84■□□□□ 0.13
NUP88-207ENST00000573584 TSTD2Q5T7W7 516 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 WSCD1Q658N2 575 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 PAOXQ6QHF9 649 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 PCDH20Q8N6Y1 951 aaKnown RBP15.84■□□□□ 0.13
NUP88-207ENST00000573584 SPATA22Q8NHS9 363 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 EME1Q96AY2 570 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 SGF29Q96ES7 293 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 DNAJC1Q96KC8 554 aaKnown RBP15.84■□□□□ 0.13
NUP88-207ENST00000573584 COLEC11Q9BWP8 271 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 FTHL17Q9BXU8 183 aa15.84■□□□□ 0.13
NUP88-207ENST00000573584 KCNU1A8MYU2 1149 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 TRIM38O00635 465 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 KCNE1P15382 129 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 CLCN2P51788 898 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 DGKDQ16760 1214 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 ZNF792Q3KQV3 632 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 PCID2Q5JVF3 399 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 IL23RQ5VWK5 629 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 PKN3Q6P5Z2 889 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 CTU1Q7Z7A3 348 aaKnown RBP15.83■□□□□ 0.12
NUP88-207ENST00000573584 EGFL6Q8IUX8 553 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 ANKRD13AQ8IZ07 590 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 FAM81AQ8TBF8 368 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 DCPSQ96C86 337 aaKnown RBP15.83■□□□□ 0.12
NUP88-207ENST00000573584 MRPL46Q9H2W6 279 aaKnown RBP15.83■□□□□ 0.12
NUP88-207ENST00000573584 WDCPQ9H6R7 721 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.83■□□□□ 0.12
NUP88-207ENST00000573584 KCNH4Q9UQ05 1017 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 AK5Q9Y6K8 562 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 FAM95CA0A1B0GW59 222 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 RBM47A0AV96 593 aaKnown RBP15.83■□□□□ 0.12
NUP88-207ENST00000573584 SDHDO14521 159 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 USP17L7P0C7H9 530 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 PSME3P61289 254 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 KIAA0319Q5VV43 1072 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 GK5Q6ZS86 529 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 MFSD6LQ8IWD5 586 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 ATP6V1E2Q96A05 226 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 ASB9Q96DX5 294 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 MAELQ96JY0 434 aaKnown RBP15.83■□□□□ 0.12
NUP88-207ENST00000573584 RBM38Q9H0Z9 239 aaKnown RBP15.83■□□□□ 0.12
NUP88-207ENST00000573584 GTSE1Q9NYZ3 720 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 FIS1Q9Y3D6 152 aa15.83■□□□□ 0.12
NUP88-207ENST00000573584 NPHS1O60500 1241 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 LRIG2O94898 1065 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 MMP3P08254 477 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 HNRNPLP14866 589 aaKnown RBP eCLIP15.82■□□□□ 0.12
NUP88-207ENST00000573584 DNAJB1P25685 340 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 DNAJB2P25686 324 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 CDC42EP1Q00587 391 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 NRF1Q16656 503 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 TRIM67Q6ZTA4 783 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 SHCBP1Q8NEM2 672 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 DDI1Q8WTU0 396 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 LENG1Q96BZ8 264 aaPredicted RBP15.82■□□□□ 0.12
NUP88-207ENST00000573584 SENP6Q9GZR1 1112 aaPredicted RBP15.82■□□□□ 0.12
NUP88-207ENST00000573584 TKTL2Q9H0I9 626 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 DDX18Q9NVP1 670 aaKnown RBP15.82■□□□□ 0.12
NUP88-207ENST00000573584 UTP6Q9NYH9 597 aaKnown RBP15.82■□□□□ 0.12
NUP88-207ENST00000573584 DMTF1Q9Y222 760 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 PCDHGA7Q9Y5G6 932 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 PDLIM1O00151 329 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 MT-CYBP00156 380 aaPredicted RBP15.82■□□□□ 0.12
NUP88-207ENST00000573584 HSPA1AP0DMV8 641 aaKnown RBP15.82■□□□□ 0.12
NUP88-207ENST00000573584 HSPA1BP0DMV9 641 aaKnown RBP15.82■□□□□ 0.12
NUP88-207ENST00000573584 ZNF26P17031 533 aaPredicted RBP15.82■□□□□ 0.12
NUP88-207ENST00000573584 TRIM25Q14258 630 aaKnown RBP15.82■□□□□ 0.12
NUP88-207ENST00000573584 MGAT5BQ3V5L5 792 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 ESRP1Q6NXG1 681 aaKnown RBP15.82■□□□□ 0.12
NUP88-207ENST00000573584 FASTKD5Q7L8L6 764 aaKnown RBP15.82■□□□□ 0.12
NUP88-207ENST00000573584 GPRIN1Q7Z2K8 1008 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 EDEM1Q92611 657 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 PCDHAC1Q9H158 963 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 SEMA6AQ9H2E6 1030 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 CNOT11Q9UKZ1 510 aaKnown RBP15.82■□□□□ 0.12
NUP88-207ENST00000573584 TMCO1Q9UM00 188 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 AP4S1Q9Y587 144 aa15.82■□□□□ 0.12
NUP88-207ENST00000573584 ARHGAP10A1A4S6 786 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 RRN3P2A6NIE6 340 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 C9IYK1 514 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 PSMD3O43242 534 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 PENKP01210 267 aaPredicted RBP15.81■□□□□ 0.12
NUP88-207ENST00000573584 PSMC3P17980 439 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 GJA9P57773 515 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 APOFQ13790 326 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 USP41Q3LFD5 358 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 TMEM259Q4ZIN3 620 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 PIWIL4Q7Z3Z4 852 aaKnown RBP15.81■□□□□ 0.12
NUP88-207ENST00000573584 CNTN4Q8IWV2 1026 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 TXNDC5Q8NBS9 432 aaKnown RBP15.81■□□□□ 0.12
NUP88-207ENST00000573584 ELMO2Q96JJ3 720 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 TBL1YQ9BQ87 522 aa15.81■□□□□ 0.12
NUP88-207ENST00000573584 MRPL57Q9BQC6 102 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms