RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 UGT2B4P06133 528 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 THEGLP0DJG4 465 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 GZMAP12544 262 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 HNRNPA2B1P22626 353 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 EPHA8P29322 1005 aaPredicted RBP12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 AKT2P31751 481 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 RHOAP61586 193 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 BNIP3Q12983 259 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 SHBQ15464 509 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 ZNF284Q2VY69 593 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 PARP15Q460N3 678 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 FIGNQ5HY92 759 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 IQCHQ86VS3 1027 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 SPATS2Q86XZ4 545 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 OXR1Q8N573 874 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 EID2Q8N6I1 236 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 TRIM11Q96F44 468 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 CELF6Q96J87 481 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 GDAP1L1Q96MZ0 367 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 CALN1Q9BXU9 219 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 TRIM7Q9C029 511 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 KLC2Q9H0B6 622 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 NOL6Q9H6R4 1146 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 ZFR2Q9UPR6 939 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 SCINQ9Y6U3 715 aa12.91□□□□□ -0.34
NPLOC4-213ENST00000573519 A0A1W2PQJ5 194 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 C16orf96A6NNT2 1141 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 PRPSAP2O60256 369 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 SDC3O75056 442 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 KRT37O76014 449 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 POP4O95707 220 aaKnown RBP12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 IGSF6O95976 241 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 CLDN2P57739 230 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 YBEYP58557 167 aaPredicted RBP12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 RAD51Q06609 339 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 OVGP1Q12889 678 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 SERINC3Q13530 473 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 CA9Q16790 459 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 MYLK3Q32MK0 819 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 ZNF805Q5CZA5 627 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 PPP6R3Q5H9R7 873 aaPredicted RBP12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 ERMARDQ5T6L9 678 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 HGSNATQ68CP4 663 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 KIAA1161Q6NSJ0 714 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 VPS36Q86VN1 386 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 PLPP6Q8IY26 295 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 SAP25Q8TEE9 199 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 GATA6Q92908 595 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 LRIG1Q96JA1 1093 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 FEM1CQ96JP0 617 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 EXOC2Q96KP1 924 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 KLHL32Q96NJ5 620 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 PEBP4Q96S96 227 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 NCAPGQ9BPX3 1015 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 SNRNP25Q9BV90 132 aaKnown RBP12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 SLC17A9Q9BYT1 436 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 ERVMER34-1Q9H9K5 563 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 MRPL47Q9HD33 250 aaKnown RBP12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 TOR4AQ9NXH8 423 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 CAPN11Q9UMQ6 739 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 FADS3Q9Y5Q0 445 aa12.9□□□□□ -0.34
NPLOC4-213ENST00000573519 CNOT1A5YKK6 2376 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 WASH4PA8MWX3 477 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 LDOC1O95751 146 aaPredicted RBP12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 PAK4O96013 591 aaPredicted RBP12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 GYPCP04921 128 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 MYBL1P10243 752 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 MIPP30301 263 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 HTR7P34969 479 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 ABL2P42684 1182 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 RPS21P63220 83 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 ZBED6P86452 979 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 SGCGQ13326 291 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 LRRC73Q5JTD7 316 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 GDPD4Q6W3E5 623 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 PTAR1Q7Z6K3 402 aaPredicted RBP12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 UMODL1-AS1Q8N2C9 162 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 ARFGAP1Q8N6T3 406 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 TMEM145Q8NBT3 493 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 OR13H1Q8NG92 308 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 CASKIN2Q8WXE0 1202 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 ZCCHC14Q8WYQ9 949 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 CNDP2Q96KP4 475 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 KCTD15Q96SI1 283 aaPredicted RBP12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 TMEM121BQ9BXQ6 578 aaPredicted RBP12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 OSBPL1AQ9BXW6 950 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 DONSONQ9NYP3 566 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 UBA2Q9UBT2 640 aaPredicted RBP12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 GGT7Q9UJ14 662 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 ZMIZ1Q9ULJ6 1067 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 ITM2BQ9Y287 266 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 LUC7L2Q9Y383 392 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 CACNA1EQ15878 2313 aa12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 TP53BP1Q12888 1972 aaPredicted RBP12.89□□□□□ -0.35
NPLOC4-213ENST00000573519 TMEM8BA6NDV4 472 aa12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 DFFAO00273 331 aa12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 ENC1O14682 589 aa12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 TSPAN6O43657 245 aa12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 AP1G1O43747 822 aa12.88□□□□□ -0.35
NPLOC4-213ENST00000573519 CASP14P31944 242 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms