RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SUN2Q9UH99 717 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 RAB21Q9UL25 225 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 FGF1P05230 155 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 FAM153BP0C7A2 387 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 CD151P48509 253 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 CACNA2D1P54289 1103 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 SLC25A11Q02978 314 aaKnown RBP10.24□□□□□ -0.77
SMG6-213ENST00000573166 SLC20A2Q08357 652 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 FAM153CQ494X1 144 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 PDPK2PQ6A1A2 396 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 DOK6Q6PKX4 331 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 ZMIZ2Q8NF64 920 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 SPATA22Q8NHS9 363 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 SPPL3Q8TCT6 385 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 AGR3Q8TD06 166 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 SRPK1Q96SB4 655 aaKnown RBP10.24□□□□□ -0.77
SMG6-213ENST00000573166 CDCA3Q99618 268 aaPredicted RBP10.24□□□□□ -0.77
SMG6-213ENST00000573166 MYOCQ99972 504 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 KXD1Q9BQD3 176 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 ZDHHC7Q9NXF8 308 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 GRID1Q9ULK0 1009 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 ILVBLA1L0T0 632 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 NDUFS2O75306 463 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 VCLP18206 1134 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 BMPR2Q13873 1038 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 NAA25Q14CX7 972 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 DLG2Q15700 870 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 MBLAC2Q68D91 279 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 PACS2Q86VP3 889 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 BBS7Q8IWZ6 715 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 ZNF567Q8N184 647 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 KCNN1Q92952 543 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 MCUR1Q96AQ8 359 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 SERPINB12Q96P63 405 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 SLC2A13Q96QE2 648 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 ASB8Q9H765 288 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 RAI2Q9Y5P3 530 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 TBC1D3DA0A087WVF3 549 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 TBC1D3IA0A087WXS9 549 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 TBC1D3EA0A087X179 549 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 TBC1D3KA0A087X1G2 549 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 TBC1D3FA6NER0 549 aaPredicted RBP10.23□□□□□ -0.77
SMG6-213ENST00000573166 PDZK1P1A8MUH7 402 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 SUPT3HB4E1H0 165 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 TBC1D3LB9A6J9 549 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 SUPT3HO75486 399 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 CNTN5O94779 1100 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 TBC1D3HP0C7X1 549 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 KRT4P19013 534 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 KCNA4P22459 653 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 VIPR2P41587 438 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 PFKPQ01813 784 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 RING1Q06587 406 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 SPANXN3Q5MJ09 141 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 DUPD1Q68J44 220 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 TBC1D3GQ6DHY5 549 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 TBC1D3CQ6IPX1 549 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 SETD3Q86TU7 594 aaPredicted RBP10.23□□□□□ -0.77
SMG6-213ENST00000573166 TBC1D3Q8IZP1 549 aaPredicted RBP10.23□□□□□ -0.77
SMG6-213ENST00000573166 MYO19Q96H55 970 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 CEP295NLQ96MC4 621 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 PWWP2AQ96N64 755 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 NINJ2Q9NZG7 142 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 FOCADQ5VW36 1801 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 PSME4Q14997 1843 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 SNAP91O60641 907 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 RNASEH2AO75792 299 aaKnown RBP10.23□□□□□ -0.77
SMG6-213ENST00000573166 POP4O95707 220 aaKnown RBP10.23□□□□□ -0.77
SMG6-213ENST00000573166 KITP10721 976 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 GP5P40197 560 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 GRM3Q14832 879 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 TMC3Q7Z5M5 1100 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 WFIKKN2Q8TEU8 576 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 SMARCD2Q92925 531 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 PEBP4Q96S96 227 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 GPAMQ9HCL2 828 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 LZTS1Q9Y250 596 aa10.23□□□□□ -0.77
SMG6-213ENST00000573166 COL11A1P12107 1806 aaPredicted RBP10.23□□□□□ -0.77
SMG6-213ENST00000573166 LCHNA4D1U4 455 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 AVILO75366 819 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 STC2O76061 302 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 MT-CYBP00156 380 aaPredicted RBP10.22□□□□□ -0.77
SMG6-213ENST00000573166 PRNPP04156 253 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 ERVK-10P10266 1014 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 LPOP22079 712 aaPredicted RBP10.22□□□□□ -0.77
SMG6-213ENST00000573166 ADRA1DP25100 572 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 HCAR3P49019 387 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 AARSP49588 968 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMG6-213ENST00000573166 DRG2P55039 364 aaKnown RBP10.22□□□□□ -0.77
SMG6-213ENST00000573166 ECT2LQ008S8 904 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 IMPG1Q17R60 797 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 ATXN7L2Q5T6C5 722 aaPredicted RBP10.22□□□□□ -0.77
SMG6-213ENST00000573166 AGAP9Q5VTM2 703 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 OTOAQ7RTW8 1153 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 C14orf80Q86SX3 495 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 NECTIN4Q96NY8 510 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 SLC25A51Q9H1U9 297 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 ADAM7Q9H2U9 754 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 GDF3Q9NR23 364 aa10.22□□□□□ -0.77
SMG6-213ENST00000573166 FAM53CQ9NYF3 392 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms