RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ZIC5Q96T25 663 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 PCYT2Q99447 389 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 RIT2Q99578 217 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 RAD9AQ99638 391 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 KCNJ15Q99712 375 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 PTPN18Q99952 460 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 USB1Q9BQ65 265 aaKnown RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 LPIN3Q9BQK8 851 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 ERP44Q9BS26 406 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 TUBGCP2Q9BSJ2 902 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 HAUS8Q9BT25 410 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 TRIM62Q9BVG3 475 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 PINK1Q9BXM7 581 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 L2HGDHQ9H9P8 463 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 GBA2Q9HCG7 927 aaPredicted RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 PDGFCQ9NRA1 345 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 CCM2LQ9NUG4 571 aaPredicted RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 AGPAT5Q9NUQ2 364 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 NUDT15Q9NV35 164 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 TMEM184CQ9NVA4 438 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 RAB20Q9NX57 234 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 DDX43Q9NXZ2 648 aaKnown RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 FAM53CQ9NYF3 392 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 OR6C2Q9NZP2 312 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 WHRNQ9P202 907 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 AJAP1Q9UKB5 411 aaPredicted RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 DSEQ9UL01 958 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 TFR2Q9UP52 801 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 CHKBQ9Y259 395 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 USP20Q9Y2K6 914 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 PCDHB5Q9Y5E4 795 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 POMT1Q9Y6A1 747 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 SHROOM3Q8TF72 1996 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 PFASO15067 1338 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 PHLPP2Q6ZVD8 1323 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 ADGRA3Q8IWK6 1321 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 SYNGAP1Q96PV0 1343 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 THSD7BQ9C0I4 1608 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 PTPRSQ13332 1948 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 TTC3P53804 2025 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 C15orf38-AP3S2A0A0A6YYH1 394 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 TRAV34A0A0B4J273 112 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 hCG_1809904A0A1W2PP81 198 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 A0A1W2PPC4 97 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 A0A1W2PPE2 198 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 GSTTP1A0A1W2PQM5 241 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 A0A1W2PR64 198 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 A0A1W2PRV1 198 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 TTC26A0AVF1 554 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 DENND3A2RUS2 1198 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 ANKRD34BA5PLL1 514 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 ARHGEF35A5YM69 484 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 GOLGA6L10A6NI86 522 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 EFCAB8A8MWE9 144 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 DCDC2CA8MYV0 355 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 SPATA31C2B4DYI2 1134 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 K7ERQ8 282 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 PDLIM1O00151 329 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 PDHXO00330 501 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 EREGO14944 169 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 HNRNPDLO14979 420 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 SLC16A4O15374 487 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 HDAC3O15379 428 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 TGFB1I1O43294 461 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 ADCY6O43306 1168 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 ADAM20O43506 726 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 KRT86O43790 486 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 NUDT21O43809 227 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 B4GALT4O60513 344 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 CBFA2T3O75081 653 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 MFAP3LO75121 409 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 LRRN2O75325 713 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 SPAG6O75602 509 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 FAM155BO75949 473 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 FARP2O94887 1054 aaPredicted RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 FTCDO95954 541 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 CST3P01034 146 aaPredicted RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 OPN1LWP04000 364 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 EDN1P05305 212 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 TPOP07202 933 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 SUPT20HL2P0C7V6 817 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 MYBL1P10243 752 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 CLUP10909 449 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 IDO1P14902 403 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 EDNRBP24530 442 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 HOXA6P31267 233 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 YWHABP31946 246 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 PSMB10P40306 273 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 CETN2P41208 172 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 HTR2BP41595 481 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 CASP3P42574 277 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 CAPZA2P47755 286 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 QARSP47897 775 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 PITPNBP48739 271 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 BMXP51813 675 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 RAC3P60763 192 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 ACTR2P61160 394 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 PSMC5P62195 406 aa3.62□□□□□ -1.83
SMG6-208ENST00000570874 TRA2BP62995 288 aaKnown RBP3.62□□□□□ -1.83
SMG6-208ENST00000570874 ERVK-9P63128 1117 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms