RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 TNFAIP3P21580 790 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 ITGB7P26010 798 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 EPHB2P29323 1055 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 AKT2P31751 481 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 L1CAMP32004 1257 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 ZNF165P49910 485 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 AIF1P55008 147 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 POLD3Q15054 466 aaPredicted RBP12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 ASIC2Q16515 512 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 CCDC157Q569K6 752 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 ACAD10Q6JQN1 1059 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 MCOLN2Q8IZK6 566 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 RYBPQ8N488 228 aaPredicted RBP12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 BAP1Q92560 729 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 ISG20Q96AZ6 181 aaKnown RBP12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 MYOCQ99972 504 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 ZDHHC6Q9H6R6 413 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 ERVMER34-1Q9H9K5 563 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 TOR4AQ9NXH8 423 aa12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 HECAQ9UBI9 543 aaPredicted RBP12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 NYNRINQ9P2P1 1898 aaKnown RBP12.59□□□□□ -0.39
CTDNEP1-205ENST00000570828 ZSCAN5CA6NGD5 496 aaPredicted RBP12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 LRRC53A6NM62 1247 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 TMCO5BA8MYB1 307 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 CREB3O43889 395 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 ADRB3P13945 408 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 SLC19A1P41440 591 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 RPL7AP62424 266 aaKnown RBP12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 SHBQ15464 509 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 ZNF284Q2VY69 593 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 FBXL19Q6PCT2 694 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 TMC6Q7Z403 805 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 IRF2BP2Q7Z5L9 587 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 SPATS2Q86XZ4 545 aaKnown RBP12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 PYROXD2Q8N2H3 581 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 RTL3Q8N8U3 475 aaKnown RBP12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 TMEM145Q8NBT3 493 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 OR6K2Q8NGY2 324 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 SAP25Q8TEE9 199 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 KLK6Q92876 244 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 VCPIP1Q96JH7 1222 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 MAGEB5Q9BZ81 275 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 CA5BQ9Y2D0 317 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 ACTL7AQ9Y615 435 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 WDFY3Q8IZQ1 3526 aa12.58□□□□□ -0.4
CTDNEP1-205ENST00000570828 A0A1W2PQC6 194 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 RNF103O00237 685 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 KRIT1O00522 736 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 BUB1O43683 1085 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 DKK1O94907 266 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 CD160O95971 181 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 GSRP00390 522 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 SERPINC1P01008 464 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 THEGLP0DJG4 465 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 HNRNPA2B1P22626 353 aaKnown RBP12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 PSMA2P25787 234 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 RXRGP48443 463 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 SNRPD1P62314 119 aaKnown RBP12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 SFMBT2Q5VUG0 894 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 SEL1L3Q68CR1 1132 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 KIAA1161Q6NSJ0 714 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 CCNI2Q6ZMN8 369 aaPredicted RBP12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 LEKR1Q6ZMV7 388 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 PARS2Q7L3T8 475 aaKnown RBP12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 GALNT15Q8N3T1 639 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 OR2AP1Q8NGE2 309 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 KLHDC7BQ96G42 594 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 LRIG1Q96JA1 1093 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 CNDP2Q96KP4 475 aaKnown RBP12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 SYT11Q9BT88 431 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 CATSPERBQ9H7T0 1116 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 FZD3Q9NPG1 666 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 PARVAQ9NVD7 372 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 TAS2R14Q9NYV8 317 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 FZD10Q9ULW2 581 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 CHD6Q8TD26 2715 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 CABIN1Q9Y6J0 2220 aa12.57□□□□□ -0.4
CTDNEP1-205ENST00000570828 A0A1B0GTH6 734 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 NEMP1O14524 444 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 ENC1O14682 589 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 FGF10O15520 208 aaPredicted RBP12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 KDELR3O43731 214 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 AP1G1O43747 822 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 SDC3O75056 442 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 TMCC1O94876 653 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 LDOC1O95751 146 aaPredicted RBP12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 UGT2B4P06133 528 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 HTR7P34969 479 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 YBEYP58557 167 aaPredicted RBP12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 TPI1P60174 286 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 RPS21P63220 83 aaKnown RBP12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 TPM4P67936 248 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 MAMLD1Q13495 774 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 PARP15Q460N3 678 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 TMEM259Q4ZIN3 620 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 SWT1Q5T5J6 900 aaKnown RBP12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 TMPRSS7Q7RTY8 843 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 ZSCAN30Q86W11 494 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 EID2Q8N6I1 236 aa12.56□□□□□ -0.4
CTDNEP1-205ENST00000570828 CASKIN2Q8WXE0 1202 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms