RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 OXNAD1Q96HP4 312 aaPredicted RBP15.64■□□□□ 0.09
HERPUD1-219ENST00000570273 MRGPRX3Q96LB0 322 aa15.64■□□□□ 0.09
HERPUD1-219ENST00000570273 RBM15Q96T37 977 aaKnown RBP eCLIP15.64■□□□□ 0.092e-8■■■■□ 24.1
HERPUD1-219ENST00000570273 MLPHQ9BV36 600 aaPredicted RBP15.64■□□□□ 0.09
HERPUD1-219ENST00000570273 CEP44Q9C0F1 390 aa15.64■□□□□ 0.09
HERPUD1-219ENST00000570273 NEUROG2Q9H2A3 272 aa15.64■□□□□ 0.09
HERPUD1-219ENST00000570273 TNKS2Q9H2K2 1166 aa15.64■□□□□ 0.09
HERPUD1-219ENST00000570273 SCUBE2Q9NQ36 999 aa15.64■□□□□ 0.09
HERPUD1-219ENST00000570273 EIF2B3Q9NR50 452 aaKnown RBP15.64■□□□□ 0.09
HERPUD1-219ENST00000570273 SLC2A4RGQ9NR83 387 aa15.64■□□□□ 0.09
HERPUD1-219ENST00000570273 UBP1Q9NZI7 540 aa15.64■□□□□ 0.09
HERPUD1-219ENST00000570273 RAB21Q9UL25 225 aa15.64■□□□□ 0.09
HERPUD1-219ENST00000570273 GOLGA8MH3BSY2 632 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 SMAPO00193 183 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 GJB3O75712 270 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 IGSF6O95976 241 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 SRPRAP08240 638 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 MYBL2P10244 700 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 MAGEA6P43360 314 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 SCNN1BP51168 640 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 GALK1P51570 392 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 DLG2Q15700 870 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 FNDC3BQ53EP0 1204 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 ALG1LQ6GMV1 187 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 TXNDC11Q6PKC3 985 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 PCDH20Q8N6Y1 951 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 PDCD7Q8N8D1 485 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 IPMKQ8NFU5 416 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 ARRDC2Q8TBH0 407 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 GDAP1L1Q96MZ0 367 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 NUDCD1Q96RS6 583 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 LRRC40Q9H9A6 602 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 ZDHHC18Q9NUE0 388 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 MTRF1LQ9UGC7 380 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 FAM153AQ9UHL3 310 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 SLCO3A1Q9UIG8 710 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 PLA2G4CQ9UP65 541 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 SLC8A2Q9UPR5 921 aa15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 AAR2Q9Y312 384 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-219ENST00000570273 ERI2A8K979 691 aaKnown RBP15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 PSMD3O43242 534 aa15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 ATP9BO43861 1147 aa15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 PMPCBO75439 489 aa15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 AP2A1O95782 977 aa15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 MT-CYBP00156 380 aaPredicted RBP15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 GSRP00390 522 aa15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 CR2P20023 1033 aa15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 ECHS1P30084 290 aa15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 SKOR1P84550 965 aa15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 MPP3Q13368 585 aa15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 SPARCL1Q14515 664 aa15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 PON2Q15165 354 aa15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 PTPRNQ16849 979 aa15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 PPP1R21Q6ZMI0 780 aa15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 CCNI2Q6ZMN8 369 aaPredicted RBP15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 PRPF39Q86UA1 669 aaKnown RBP15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 RYBPQ8N488 228 aaPredicted RBP15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 EIF1ADQ8N9N8 165 aaKnown RBP15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 ISG20Q96AZ6 181 aaKnown RBP15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 MSANTD3Q96H12 275 aa15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 FMO2Q99518 471 aa15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 DUSP12Q9UNI6 340 aa15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 TCF20Q9UGU0 1960 aaKnown RBP15.62■□□□□ 0.09
HERPUD1-219ENST00000570273 TTC34A8MYJ7 566 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 TP73O15350 636 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 INSIG1O15503 277 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 BNIP3LO60238 219 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 MMP2P08253 660 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 SERPINF2P08697 491 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 GLULP15104 373 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 CES1P23141 567 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 MAPK8P45983 427 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 VASPP50552 380 aaPredicted RBP15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 AP1S1P61966 158 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 SNRPD1P62314 119 aaKnown RBP15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 SARNPP82979 210 aaKnown RBP15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 CDK16Q00536 496 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 NSUN2Q08J23 767 aaKnown RBP eCLIP15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 PCSK7Q16549 785 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 RALGPS1Q5JS13 557 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 TJAP1Q5JTD0 557 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 DGKKQ5KSL6 1271 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 KDELC1Q6UW63 502 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 TPRG1Q6ZUI0 275 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 Q6ZVU0 165 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 SRLQ86TD4 932 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 KLHDC8BQ8IXV7 354 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 ZCCHC9Q8N567 271 aaKnown RBP15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 OR2AP1Q8NGE2 309 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 OR6K2Q8NGY2 324 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 FICDQ9BVA6 458 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 FSD1LQ9BXM9 530 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 NOD2Q9HC29 1040 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 FBRSL1Q9HCM7 1045 aaKnown RBP15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 VPS45Q9NRW7 570 aa15.61■□□□□ 0.09
HERPUD1-219ENST00000570273 ERLIN1O75477 346 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 ZNF821O75541 412 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 TNFRSF4P43489 277 aa15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 TNNT3P45378 269 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-219ENST00000570273 RECQLP46063 649 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms