RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PARP15Q460N3 678 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 DCUN1D2Q6PH85 259 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ABI3BPQ7Z7G0 1075 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 DCP2Q8IU60 420 aaKnown RBP17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 PYROXD2Q8N2H3 581 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 GALNT15Q8N3T1 639 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ASB12Q8WXK4 309 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 IFT43Q96FT9 208 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 CATSPERBQ9H7T0 1116 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 TAS2R14Q9NYV8 317 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 HECAQ9UBI9 543 aaPredicted RBP17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 DKK4Q9UBT3 224 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 MFHAS1Q9Y4C4 1052 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 FADS3Q9Y5Q0 445 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 HS3ST3A1Q9Y663 406 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ZFHX4Q86UP3 3567 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 CHD6Q8TD26 2715 aa17.37■□□□□ 0.37
MAP1LC3B-208ENST00000570189 POP4O95707 220 aaKnown RBP17.37■□□□□ 0.37
MAP1LC3B-208ENST00000570189 AKT2P31751 481 aa17.37■□□□□ 0.37
MAP1LC3B-208ENST00000570189 IL9RQ01113 521 aa17.37■□□□□ 0.37
MAP1LC3B-208ENST00000570189 SERINC3Q13530 473 aa17.37■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ZNF805Q5CZA5 627 aa17.37■□□□□ 0.37
MAP1LC3B-208ENST00000570189 PARS2Q7L3T8 475 aaKnown RBP17.37■□□□□ 0.37
MAP1LC3B-208ENST00000570189 TMC6Q7Z403 805 aa17.37■□□□□ 0.37
MAP1LC3B-208ENST00000570189 PSTKQ8IV42 348 aaKnown RBP17.37■□□□□ 0.37
MAP1LC3B-208ENST00000570189 TSC1Q92574 1164 aa17.37■□□□□ 0.37
MAP1LC3B-208ENST00000570189 KLHDC7BQ96G42 594 aa17.37■□□□□ 0.37
MAP1LC3B-208ENST00000570189 FEM1CQ96JP0 617 aa17.37■□□□□ 0.37
MAP1LC3B-208ENST00000570189 NAP1L5Q96NT1 182 aaPredicted RBP17.37■□□□□ 0.37
MAP1LC3B-208ENST00000570189 LENG8Q96PV6 779 aaPredicted RBP17.37■□□□□ 0.37
MAP1LC3B-208ENST00000570189 HAUS4Q9H6D7 363 aa17.37■□□□□ 0.37
MAP1LC3B-208ENST00000570189 GOLGA4Q13439 2230 aaKnown RBP17.37■□□□□ 0.37
MAP1LC3B-208ENST00000570189 TDRD6O60522 2096 aaKnown RBP17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 TMEM191CA6NGB0 347 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 TSPAN6O43657 245 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ZNF135P52742 658 aaPredicted RBP17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ASIC2Q16515 512 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 MYLK3Q32MK0 819 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 PRAMEF14Q5SWL7 426 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 E4F1Q66K89 784 aaPredicted RBP17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 SCYL2Q6P3W7 929 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 FBXL19Q6PCT2 694 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 GCNT7Q6ZNI0 430 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ZNF571Q7Z3V5 609 aaPredicted RBP17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 GATAD2AQ86YP4 633 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 HCAR2Q8TDS4 363 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ZCCHC14Q8WYQ9 949 aaKnown RBP17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ARHGEF26Q96DR7 871 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 NCAPGQ9BPX3 1015 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 C1QTNF2Q9BXJ5 285 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 TM6SF2Q9BZW4 377 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ZDHHC6Q9H6R6 413 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 LRRC19Q9H756 370 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 KLHL11Q9NVR0 708 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ACTL7AQ9Y615 435 aa17.36■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ANKRD11Q6UB99 2663 aaPredicted RBP17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ANKRD36A6QL64 1941 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 LRRK1Q38SD2 2015 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 A0A1W2PQJ5 194 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 C16orf96A6NNT2 1141 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 RASA4BC9J798 803 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ENC1O14682 589 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 AREL1O15033 823 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 RASA4O43374 803 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 TMCC1O94876 653 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 PCDH8O95206 1070 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 THEGLP0DJG4 465 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 MYBL1P10243 752 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 PBX1P40424 430 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 DNA2P51530 1060 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 NDST2P52849 883 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ILKQ13418 452 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 SEL1L3Q68CR1 1132 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 KYAT3Q6YP21 454 aaKnown RBP17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ARFGAP1Q8N6T3 406 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 DENND6BQ8NEG7 585 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 SYN2Q92777 582 aaPredicted RBP17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 IQCDQ96DY2 449 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 TRIM11Q96F44 468 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 CNDP2Q96KP4 475 aaKnown RBP17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 GDAP1L1Q96MZ0 367 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 SLC17A9Q9BYT1 436 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 CPEB1Q9BZB8 566 aaKnown RBP17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ISCUQ9H1K1 167 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 DKK3Q9UBP4 350 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 SCINQ9Y6U3 715 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 MYLKQ15746 1914 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 PKD1L2Q7Z442 2459 aa17.35■□□□□ 0.37
MAP1LC3B-208ENST00000570189 A6NNZ2 444 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 DDX3XO00571 662 aaKnown RBP eCLIP17.34■□□□□ 0.372e-11■■■■■ 29.6
MAP1LC3B-208ENST00000570189 SLC31A1O15431 190 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 CREB3O43889 395 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 LDOC1O95751 146 aaPredicted RBP17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 PRLRP16471 622 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 HCAR3P49019 387 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ACADVLP49748 655 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 SUOXP51687 545 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 TPI1P60174 286 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 RAD51Q06609 339 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 BNIP3Q12983 259 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms