RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ATP11BQ9Y2G3 1177 aa7.48□□□□□ -1.21
CNOT1-222ENST00000570139 PMF1-BGLAPU3KQ54 211 aa7.48□□□□□ -1.21
CNOT1-222ENST00000570139 OR2W5A6NFC9 320 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 MAPK13O15264 365 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 MAGEB2O15479 319 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 TSPAN3O60637 253 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 TMEM63AO94886 807 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 STBD1O95210 358 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 ANXA6P08133 673 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 ZNF888P0CJ79 500 aaPredicted RBP7.47□□□□□ -1.21
CNOT1-222ENST00000570139 AKR1A1P14550 325 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 FDXRP22570 491 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 CSF2RBP32927 897 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 NAMPTP43490 491 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 PSMC4P43686 418 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 STX17P56962 302 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 ADAM8P78325 824 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 GTF2BQ00403 316 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 SP4Q02446 784 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 SP3Q02447 781 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 KRT17Q04695 432 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 ENPEPQ07075 957 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 PIGFQ07326 219 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.47□□□□□ -1.21
CNOT1-222ENST00000570139 GPS1Q13098 491 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 ATP1A4Q13733 1029 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 MXD4Q14582 209 aaPredicted RBP7.47□□□□□ -1.21
CNOT1-222ENST00000570139 EMC2Q15006 297 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 TRIM60Q495X7 471 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 WDR45BQ5MNZ6 344 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 MFSD14CQ5VZR4 134 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 PLA2G4FQ68DD2 849 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 SPECC1LQ69YQ0 1117 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 PDXDC1Q6P996 788 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 C12orf56Q8IXR9 622 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 DAW1Q8N136 415 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 OR6J1Q8NGC5 347 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 ZFP28Q8NHY6 868 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 TBC1D15Q8TC07 691 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 CPT1CQ8TCG5 803 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 CPT1BQ92523 772 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 RABGGTAQ92696 567 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 ZUFSPQ96AP4 578 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 RSRC1Q96IZ7 334 aaKnown RBP7.47□□□□□ -1.21
CNOT1-222ENST00000570139 CNOT6LQ96LI5 555 aaKnown RBP7.47□□□□□ -1.21
CNOT1-222ENST00000570139 KLHL32Q96NJ5 620 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 MED15Q96RN5 788 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 STRA6Q9BX79 667 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 PAIP1Q9H074 479 aaKnown RBP7.47□□□□□ -1.21
CNOT1-222ENST00000570139 TMEM168Q9H0V1 697 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 C2orf40Q9H1Z8 148 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 R3HDMLQ9H3Y0 253 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 EPS8L2Q9H6S3 715 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 SAMSN1Q9NSI8 373 aaKnown RBP7.47□□□□□ -1.21
CNOT1-222ENST00000570139 FBXO34Q9NWN3 711 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 NDUFAF4Q9P032 175 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 DAPP1Q9UN19 280 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 TBC1D30Q9Y2I9 924 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.47□□□□□ -1.21
CNOT1-222ENST00000570139 CDY1Q9Y6F8 540 aa7.47□□□□□ -1.21
CNOT1-222ENST00000570139 IGKV6-21A0A0C4DH24 114 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 TEX51A0A1B0GUA7 166 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 A0A1W2PPH5 198 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 TRIM49BA6NDI0 452 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 RSPH10B2B2RC85 870 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 ASAP2O43150 1006 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 AP5Z1O43299 807 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 LGALS2P05162 132 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 MMP3P08254 477 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 CNPP09543 421 aaKnown RBP7.46□□□□□ -1.22
CNOT1-222ENST00000570139 RSPH10BP0C881 870 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 EPB41P11171 864 aaKnown RBP7.46□□□□□ -1.22
CNOT1-222ENST00000570139 CHMP24386 653 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 NR2F2P24468 414 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 TMOD1P28289 359 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 LRPAP1P30533 357 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 AKT1P31749 480 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 RAD52P43351 418 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 MTIF2P46199 727 aaKnown RBP7.46□□□□□ -1.22
CNOT1-222ENST00000570139 LIMS1P48059 325 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 EFNA5P52803 228 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 COPB1P53618 953 aaKnown RBP7.46□□□□□ -1.22
CNOT1-222ENST00000570139 PTTG1IPP53801 180 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 NFYCQ13952 458 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 TFDP1Q14186 410 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 KRT31Q15323 416 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 RPS6KA2Q15349 733 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 ZNF750Q32MQ0 723 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 CCDC40Q4G0X9 1142 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 ATXN7L2Q5T6C5 722 aaPredicted RBP7.46□□□□□ -1.22
CNOT1-222ENST00000570139 ATG16L1Q676U5 607 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 ACAD10Q6JQN1 1059 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 MPZL3Q6UWV2 235 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 LRRC55Q6ZSA7 311 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 RRAGAQ7L523 313 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 HAUS6Q7Z4H7 955 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 TLK2Q86UE8 772 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 VSTM4Q8IW00 320 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 SYCP3Q8IZU3 236 aa7.46□□□□□ -1.22
CNOT1-222ENST00000570139 KLHL36Q8N4N3 616 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms