RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 TBC1D3GQ6DHY5 549 aa11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 TBC1D3CQ6IPX1 549 aa11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 TMCO3Q6UWJ1 677 aa11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 ERN2Q76MJ5 926 aaKnown RBP11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 TMTC1Q8IUR5 882 aa11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 TBC1D3Q8IZP1 549 aaPredicted RBP11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 NETO2Q8NC67 525 aa11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 OR6K2Q8NGY2 324 aa11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 SNX19Q92543 992 aa11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 PPP1R16AQ96I34 528 aa11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 GDAP1L1Q96MZ0 367 aa11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 PREBQ9HCU5 417 aa11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 TM9SF3Q9HD45 589 aa11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 TMEM9BQ9NQ34 198 aa11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 FSCN3Q9NQT6 498 aa11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 LHX3Q9UBR4 397 aa11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 UBA2Q9UBT2 640 aaPredicted RBP11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 EPN1Q9Y6I3 576 aaPredicted RBP11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 CNOT1A5YKK6 2376 aaKnown RBP11.25□□□□□ -0.61
SHCBP1-207ENST00000569702 C4orf47A7E2U8 309 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 DFFAO00273 331 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 NDUFA10O95299 355 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 SYPP08247 313 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 CYLC1P35663 651 aaPredicted RBP11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 SLC1A1P43005 524 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 AFF3P51826 1226 aaKnown RBP11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 RHOAP61586 193 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 PPP2CBP62714 309 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 RACK1P63244 317 aaKnown RBP11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 PPP2CAP67775 309 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 BNC1Q01954 994 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 KRT81Q14533 505 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 RFTN1Q14699 578 aaPredicted RBP11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 ZNF805Q5CZA5 627 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 LRRC38Q5VT99 294 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 NEK5Q6P3R8 708 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 ARHGAP36Q6ZRI8 547 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 TRIM69Q86WT6 500 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 RYBPQ8N488 228 aaPredicted RBP11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 PCDH19Q8TAB3 1148 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 FAF2Q96CS3 445 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 ZNF599Q96NL3 588 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 ZNF670Q9BS34 389 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 OSBPL1AQ9BXW6 950 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 CPEB1Q9BZB8 566 aaKnown RBP11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 ZDHHC5Q9C0B5 715 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 ZDHHC6Q9H6R6 413 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 DYRK4Q9NR20 520 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 IMPACTQ9P2X3 320 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 IPO11Q9UI26 975 aaKnown RBP11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 PCDHA13Q9Y5I0 950 aa11.24□□□□□ -0.61
SHCBP1-207ENST00000569702 ASCC3Q8N3C0 2202 aaKnown RBP11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 A0A0A6YYK5 440 aaPredicted RBP11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 SOWAHDA6NJG2 315 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 TMEM110-MUSTN1A8MSY1 372 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 KRIT1O00522 736 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 AP1G1O43747 822 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 MAFKO60675 156 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 GJB3O75712 270 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 PALMO75781 387 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 IGSF6O95976 241 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 PEX11BO96011 259 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 ADRB3P13945 408 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 SERPINB6P35237 376 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 GJC1P36383 396 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 NUDT1P36639 197 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 MAPK8P45983 427 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 GRIA4P48058 902 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 CSNK1DP48730 415 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 CSNK1EP49674 416 aaKnown RBP11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 NEK3P51956 506 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 RAD51Q06609 339 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 NSUN2Q08J23 767 aaKnown RBP eCLIP11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 GRIK2Q13002 908 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 PAFAH1B3Q15102 231 aaKnown RBP11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 SPA17Q15506 151 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 ANKRD20A8PQ5CZ79 823 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 GDPD4Q6W3E5 623 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 RAD9BQ6WBX8 426 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 PARS2Q7L3T8 475 aaKnown RBP11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 TMEM139Q8IV31 216 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 MAP7D3Q8IWC1 876 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 MINDY1Q8N5J2 469 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 KCTD6Q8NC69 237 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 TSEN2Q8NCE0 465 aaKnown RBP11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 RAPGEF5Q92565 580 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 EXOC2Q96KP1 924 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 CALN1Q9BXU9 219 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 SP110Q9HB58 689 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 DNAAF2Q9NVR5 837 aaKnown RBP11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 TFR2Q9UP52 801 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 DMTF1Q9Y222 760 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 FADS3Q9Y5Q0 445 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 ADAMTS9Q9P2N4 1935 aa11.23□□□□□ -0.61
SHCBP1-207ENST00000569702 A0A1B0GVT2 93 aa11.22□□□□□ -0.61
SHCBP1-207ENST00000569702 A0A1W2PR77 199 aa11.22□□□□□ -0.61
SHCBP1-207ENST00000569702 DCDC2BA2VCK2 349 aa11.22□□□□□ -0.61
SHCBP1-207ENST00000569702 C3orf70A6NLC5 250 aaPredicted RBP11.22□□□□□ -0.61
SHCBP1-207ENST00000569702 C16orf96A6NNT2 1141 aa11.22□□□□□ -0.61
SHCBP1-207ENST00000569702 ZNF487B1APH4 448 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms