RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 L1CAMP32004 1257 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 STAT1P42224 750 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 DNA2P51530 1060 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 RPL7AP62424 266 aaKnown RBP14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 TYRO3Q06418 890 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 LRRC73Q5JTD7 316 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 RWDD4Q6NW29 188 aaKnown RBP14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 CAVIN1Q6NZI2 390 aaKnown RBP14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 TRIM72Q6ZMU5 477 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 TMPRSS12Q86WS5 348 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 DNAAF5Q86Y56 855 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 OXR1Q8N573 874 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 C3orf20Q8ND61 904 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 ANKRD20A12PQ8NF67 263 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 HNRNPLLQ8WVV9 542 aaKnown RBP14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 CCDC114Q96M63 670 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 ERGIC2Q96RQ1 377 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 HEPHQ9BQS7 1158 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 CALN1Q9BXU9 219 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 ZDHHC6Q9H6R6 413 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 KLHL11Q9NVR0 708 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 TAS2R14Q9NYV8 317 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 ADAM22Q9P0K1 906 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 KLF15Q9UIH9 416 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 PNMA8BQ9ULN7 279 aaPredicted RBP14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 KALRNO60229 2985 aa14.09□□□□□ -0.15
GTF3C1-211ENST00000569653 LRRC10BA6NIK2 292 aa14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 FFAR2O15552 330 aa14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 PIAS2O75928 621 aa14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 KRT3P12035 628 aa14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 CKMT2P17540 419 aa14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 GPD1P21695 349 aa14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 MAPKAPK2P49137 400 aa14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 NEK3P51956 506 aa14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 INSM1Q01101 510 aaPredicted RBP14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 C1QBPQ07021 282 aaKnown RBP14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 SLC20A2Q08357 652 aa14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 TARDBPQ13148 414 aaKnown RBP eCLIP14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 FZD2Q14332 565 aa14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 FKBP15Q5T1M5 1219 aa14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 ACBD5Q5T8D3 534 aaPredicted RBP14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 E4F1Q66K89 784 aaPredicted RBP14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 Q6ZSR6 202 aa14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 PDCD7Q8N8D1 485 aaKnown RBP14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 NTAN1Q96AB6 310 aa14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 ISG20Q96AZ6 181 aaKnown RBP14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 TBC1D31Q96DN5 1066 aa14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 HECAQ9UBI9 543 aaPredicted RBP14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 FARP1Q9Y4F1 1045 aaPredicted RBP14.08□□□□□ -0.16
GTF3C1-211ENST00000569653 IGLON5A6NGN9 336 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 SIGLEC16A6NMB1 481 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 TEX33O43247 280 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 TLX3O43711 291 aaPredicted RBP14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 AP1G1O43747 822 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 PAK4O96013 591 aaPredicted RBP14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 UGT2B4P06133 528 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 ACP1P24666 158 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 AKT2P31751 481 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 RECQLP46063 649 aaPredicted RBP14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 NSFP46459 744 aaKnown RBP14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 KLHL40Q2TBA0 621 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 PDZD3Q86UT5 571 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 NEK11Q8NG66 645 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 OR4C6Q8NH72 309 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 RFFLQ8WZ73 363 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 BBC3Q96PG8 261 aaPredicted RBP14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 AGPAT1Q99943 283 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 C1QTNF2Q9BXJ5 285 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 SLC17A9Q9BYT1 436 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 MAGEH1Q9H213 219 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 DYRK4Q9NR20 520 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 TMEM51Q9NW97 253 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 ATMQ13315 3056 aa14.07□□□□□ -0.16
GTF3C1-211ENST00000569653 C16orf96A6NNT2 1141 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 AREL1O15033 823 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 CASC3O15234 703 aaKnown RBP14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 INSIG1O15503 277 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 KDELR3O43731 214 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 RAMP2O60895 175 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 NEBLO76041 1014 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 TMCC1O94876 653 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 C1SP09871 688 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 ZNF143P52747 638 aaPredicted RBP14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 UBXN1Q04323 297 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 ZNF211Q13398 564 aaPredicted RBP14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 NFKBIBQ15653 356 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 KYAT3Q6YP21 454 aaKnown RBP14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 NYAP1Q6ZVC0 841 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 IRF2BP2Q7Z5L9 587 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 PTAR1Q7Z6K3 402 aaPredicted RBP14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 PLPP6Q8IY26 295 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 AOPEPQ8N6M6 819 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 ARFGAP1Q8N6T3 406 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 RTL3Q8N8U3 475 aaKnown RBP14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 OR2AP1Q8NGE2 309 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 HMCESQ96FZ2 354 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 PPP1R16AQ96I34 528 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 MCEEQ96PE7 176 aa14.06□□□□□ -0.16
GTF3C1-211ENST00000569653 SELENOOQ9BVL4 669 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms