RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 CYP4F2P78329 520 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 KRT83P78385 493 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 PRRT3Q5FWE3 981 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 NEK5Q6P3R8 708 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 C11orf57Q6ZUT1 292 aaPredicted RBP15.13■□□□□ 0.01
USB1-214ENST00000568848 VASH2Q86V25 355 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 VPS36Q86VN1 386 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 CREBRFQ8IUR6 639 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 DRC7Q8IY82 874 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 RYBPQ8N488 228 aaPredicted RBP15.13■□□□□ 0.01
USB1-214ENST00000568848 DCAF4L2Q8NA75 395 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 EXTL1Q92935 676 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 CCDC3Q9BQI4 270 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 C2orf49Q9BVC5 232 aaPredicted RBP15.13■□□□□ 0.01
USB1-214ENST00000568848 TRIM62Q9BVG3 475 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 SRRTQ9BXP5 876 aaKnown RBP15.13■□□□□ 0.01
USB1-214ENST00000568848 DPH1Q9BZG8 443 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 EPB41L5Q9HCM4 733 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 MBNL1Q9NR56 388 aaKnown RBP15.13■□□□□ 0.01
USB1-214ENST00000568848 ARHGEF38Q9NXL2 777 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 GULP1Q9UBP9 304 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 ZNF212Q9UDV6 495 aa15.13■□□□□ 0.01
USB1-214ENST00000568848 FARP1Q9Y4F1 1045 aaPredicted RBP15.13■□□□□ 0.01
USB1-214ENST00000568848 UBR5O95071 2799 aaPredicted RBP15.13■□□□□ 0.01
USB1-214ENST00000568848 RELNP78509 3460 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 FLNCQ14315 2725 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 EME2A4GXA9 379 aaPredicted RBP15.12■□□□□ 0.01
USB1-214ENST00000568848 P4HA2O15460 535 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 OR1E1P30953 314 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 L1CAMP32004 1257 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 CXCR3P49682 368 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 SERPINH1P50454 418 aaKnown RBP15.12■□□□□ 0.01
USB1-214ENST00000568848 DUSP3P51452 185 aaPredicted RBP15.12■□□□□ 0.01
USB1-214ENST00000568848 RPS21P63220 83 aaKnown RBP15.12■□□□□ 0.01
USB1-214ENST00000568848 SLC6A3Q01959 620 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 CETN1Q12798 172 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 BECN1Q14457 450 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 EFHC1Q5JVL4 640 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 ATXN7L2Q5T6C5 722 aaPredicted RBP15.12■□□□□ 0.01
USB1-214ENST00000568848 TRIM65Q6PJ69 517 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 PHLDB2Q86SQ0 1253 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 SLC47A2Q86VL8 602 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 JAMLQ86YT9 394 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 PHACTR4Q8IZ21 702 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 KYQ8NBH2 561 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 SNRNP27Q8WVK2 155 aaKnown RBP15.12■□□□□ 0.01
USB1-214ENST00000568848 WBP1Q96G27 269 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 DHTKD1Q96HY7 919 aaPredicted RBP15.12■□□□□ 0.01
USB1-214ENST00000568848 NPY6RQ99463 290 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 IL12RB2Q99665 862 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 DUSP23Q9BVJ7 150 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 ATP13A1Q9HD20 1204 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 APOBEC3BQ9UH17 382 aaKnown RBP15.12■□□□□ 0.01
USB1-214ENST00000568848 COQ6Q9Y2Z9 468 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.12■□□□□ 0.01
USB1-214ENST00000568848 HS3ST3A1Q9Y663 406 aa15.12■□□□□ 0.01
USB1-214ENST00000568848 LRRK1Q38SD2 2015 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 DRGXA6NNA5 263 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 FPGTO14772 594 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 YY2O15391 372 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 NOBOXO60393 691 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 FAM87AP0C7U9 286 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 TSHRP16473 764 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 ITIH1P19827 911 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 ITGB7P26010 798 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 SLC5A2P31639 672 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 FLT3P36888 993 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 RECQLP46063 649 aaPredicted RBP15.11■□□□□ 0.01
USB1-214ENST00000568848 RABIFP47224 123 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 PFN3P60673 137 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 CARD16Q5EG05 197 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 SDR16C5Q8N3Y7 309 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 FUBP1Q96AE4 644 aaKnown RBP15.11■□□□□ 0.01
USB1-214ENST00000568848 CCDC74AQ96AQ1 378 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 FEM1CQ96JP0 617 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 CCDC114Q96M63 670 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 HEPHQ9BQS7 1158 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 WRAP53Q9BUR4 548 aaKnown RBP15.11■□□□□ 0.01
USB1-214ENST00000568848 BOCQ9BWV1 1114 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 C1QTNF2Q9BXJ5 285 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 WDCPQ9H6R7 721 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 SYNCQ9H7C4 482 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 ASNSD1Q9NWL6 643 aa15.11■□□□□ 0.01
USB1-214ENST00000568848 HECAQ9UBI9 543 aaPredicted RBP15.11■□□□□ 0.01
USB1-214ENST00000568848 C16orf96A6NNT2 1141 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 H3BM21 787 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 GOLGA8SH3BPF8 625 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 LZTS3O60299 673 aaPredicted RBP15.1■□□□□ 0.01
USB1-214ENST00000568848 MMP20O60882 483 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 UGT2B4P06133 528 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 GLI1P08151 1106 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 NOS2P35228 1153 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 CCL7P80098 99 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 DEUP1Q05D60 604 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 STIM1Q13586 685 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 SPIDRQ14159 915 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 KIAA1161Q6NSJ0 714 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 SLC26A9Q7LBE3 791 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 FAM131BQ86XD5 332 aa15.1■□□□□ 0.01
USB1-214ENST00000568848 WDR36Q8NI36 951 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms