RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 LIMS1P48059 325 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 CACNA2D1P54289 1103 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 POU5F1Q01860 360 aaKnown RBP5.93□□□□□ -1.46
CDH13-211ENST00000568770 SEMG2Q02383 582 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 MYO1EQ12965 1108 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 SSPNQ14714 243 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 SMAD1Q15797 465 aaKnown RBP5.93□□□□□ -1.46
CDH13-211ENST00000568770 TMEM119Q4V9L6 283 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 DCAF12L1Q5VU92 463 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 GRAMD4Q6IC98 578 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 TEPPQ6URK8 271 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 IL27RAQ6UWB1 636 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 KIAA1324Q6UXG2 1013 aaKnown RBP5.93□□□□□ -1.46
CDH13-211ENST00000568770 CD300LDQ6UXZ3 194 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 ATG14Q6ZNE5 492 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 BBS7Q8IWZ6 715 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 PPM1KQ8N3J5 372 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 LRRC52Q8N7C0 313 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 LSM14AQ8ND56 463 aaKnown RBP5.93□□□□□ -1.46
CDH13-211ENST00000568770 CADM4Q8NFZ8 388 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 CACTINQ8WUQ7 758 aaKnown RBP5.93□□□□□ -1.46
CDH13-211ENST00000568770 KBTBD7Q8WVZ9 684 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 CPA5Q8WXQ8 436 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 PCED1BQ96HM7 432 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 CDK5RAP3Q96JB5 506 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 NOX5Q96PH1 765 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 SLITRK1Q96PX8 696 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 FIZ1Q96SL8 496 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 SYT15Q9BQS2 421 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 FAM213AQ9BRX8 229 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 SPHK2Q9NRA0 654 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 DNAJC17Q9NVM6 304 aaKnown RBP5.93□□□□□ -1.46
CDH13-211ENST00000568770 WSB2Q9NYS7 404 aaPredicted RBP5.93□□□□□ -1.46
CDH13-211ENST00000568770 DTLQ9NZJ0 730 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 ITGA11Q9UKX5 1188 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 CDH9Q9ULB4 789 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 MAPRE3Q9UPY8 281 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 SH3BP1Q9Y3L3 701 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 NFE2L3Q9Y4A8 694 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 PCDHGB2Q9Y5G2 931 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 ATP23Q9Y6H3 246 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 NYNRINQ9P2P1 1898 aaKnown RBP5.93□□□□□ -1.46
CDH13-211ENST00000568770 BSNQ9UPA5 3926 aa5.93□□□□□ -1.46
CDH13-211ENST00000568770 DOCK9Q9BZ29 2069 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 A0A1B0GVT2 93 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 NEDD8-MDP1E9PL57 170 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 CAPN9O14815 690 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 PAX4O43316 350 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 TLX3O43711 291 aaPredicted RBP5.92□□□□□ -1.46
CDH13-211ENST00000568770 TBCAO75347 108 aaKnown RBP5.92□□□□□ -1.46
CDH13-211ENST00000568770 KRT18P05783 430 aaKnown RBP5.92□□□□□ -1.46
CDH13-211ENST00000568770 MED14OSP0DP75 135 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 IRF1P10914 325 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 TYRP14679 529 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 FAHP16930 419 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 GLDCP23378 1020 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 ABCD1P33897 745 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 CSNK1EP49674 416 aaKnown RBP5.92□□□□□ -1.46
CDH13-211ENST00000568770 TPMTP51580 245 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 ANAPC15P60006 121 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 RBP5P82980 135 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 CFHR1Q03591 330 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 MAPRE1Q15691 268 aaKnown RBP5.92□□□□□ -1.46
CDH13-211ENST00000568770 FUT11Q495W5 492 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 FIGNQ5HY92 759 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 MDH1BQ5I0G3 518 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 PCSK4Q6UW60 755 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 DHRS13Q6UX07 377 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 CCDC83Q8IWF9 413 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 TRIM48Q8IWZ4 208 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 NLGN4XQ8N0W4 816 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 POU5F2Q8N7G0 328 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 MYCBPAPQ8TBZ2 947 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 SCFD1Q8WVM8 642 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 DLG3Q92796 817 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 WBP2Q969T9 261 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 NXPE2Q96DL1 559 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 SAAL1Q96ER3 474 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 C8orf48Q96LL4 319 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 LLPHQ9BRT6 129 aaKnown RBP5.92□□□□□ -1.46
CDH13-211ENST00000568770 BBS2Q9BXC9 721 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 MTMR12Q9C0I1 747 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 CAAP1Q9H8G2 361 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 ITM2CQ9NQX7 267 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 TMEM30AQ9NV96 361 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 RIC8BQ9NVN3 520 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 RBAKQ9NYW8 714 aaPredicted RBP5.92□□□□□ -1.46
CDH13-211ENST00000568770 USP36Q9P275 1121 aaKnown RBP5.92□□□□□ -1.46
CDH13-211ENST00000568770 CHORDC1Q9UHD1 332 aaPredicted RBP5.92□□□□□ -1.46
CDH13-211ENST00000568770 EIF2B4Q9UI10 523 aaKnown RBP5.92□□□□□ -1.46
CDH13-211ENST00000568770 SIX4Q9UIU6 781 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 PRKAB1Q9Y478 270 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 SLCO1B1Q9Y6L6 691 aa5.92□□□□□ -1.46
CDH13-211ENST00000568770 ARID1BQ8NFD5 2236 aaPredicted RBP5.92□□□□□ -1.46
CDH13-211ENST00000568770 TDRD6O60522 2096 aaKnown RBP5.92□□□□□ -1.46
CDH13-211ENST00000568770 GOLGA8IPA6NC78 632 aa5.91□□□□□ -1.46
CDH13-211ENST00000568770 GOLGA8JA6NMD2 632 aa5.91□□□□□ -1.46
CDH13-211ENST00000568770 E9PAM4 449 aa5.91□□□□□ -1.46
CDH13-211ENST00000568770 RRP8O43159 456 aaKnown RBP5.91□□□□□ -1.46
CDH13-211ENST00000568770 CACNG3O60359 315 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms