RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 PPP1R3AQ16821 1122 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 SV2CQ496J9 727 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 NOMO2Q5JPE7 1267 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 DPF3Q92784 378 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 VTA1Q9NP79 307 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 GMPR2Q9P2T1 348 aaKnown RBP18.56■□□□□ 0.56
PKD1-235ENST00000568591 MTF2Q9Y483 593 aaPredicted RBP18.56■□□□□ 0.56
PKD1-235ENST00000568591 DFFAO00273 331 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 TRPA1O75762 1119 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 MT-CO1P00395 513 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 FAM200BP0CF97 657 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 CYP2C9P11712 490 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 WARSP23381 471 aaKnown RBP18.56■□□□□ 0.56
PKD1-235ENST00000568591 NPY2RP49146 381 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 PLK1P53350 603 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 INHBCP55103 352 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 CDH17Q12864 832 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 MYLK3Q32MK0 819 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 KLHDC10Q6PID8 442 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 PDCD6IPQ8WUM4 868 aaKnown RBP18.56■□□□□ 0.56
PKD1-235ENST00000568591 KCTD13Q8WZ19 329 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 EMID1Q96A84 441 aaPredicted RBP18.56■□□□□ 0.56
PKD1-235ENST00000568591 PCED1BQ96HM7 432 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 ADA2Q9NZK5 511 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 IPPQ9Y573 584 aa18.56■□□□□ 0.56
PKD1-235ENST00000568591 PRSS51A0A1B0GVH4 220 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 FAM95CA0A1B0GW59 222 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 SDHDO14521 159 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 PTGESO14684 152 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 H2AFYO75367 372 aaKnown RBP18.55■□□□□ 0.56
PKD1-235ENST00000568591 SMIM10L2AP0DMW4 78 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 SMIM10L2BP0DMW5 78 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 CHRNA4P43681 627 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 TAS2R39P59534 338 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 SLC12A1Q13621 1099 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 ZNF789Q5FWF6 425 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 RNF135Q8IUD6 432 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 SMG8Q8ND04 991 aaKnown RBP18.55■□□□□ 0.56
PKD1-235ENST00000568591 ZFP28Q8NHY6 868 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 CDCA5Q96FF9 252 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 KIFC1Q9BW19 673 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 DDX18Q9NVP1 670 aaKnown RBP18.55■□□□□ 0.56
PKD1-235ENST00000568591 GTSE1Q9NYZ3 720 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 SMIM31A0A1B0GVY4 71 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 BCAS2O75934 225 aaPredicted RBP18.55■□□□□ 0.56
PKD1-235ENST00000568591 SLC1A2P43004 574 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 R3HDM1Q15032 1099 aaKnown RBP18.55■□□□□ 0.56
PKD1-235ENST00000568591 SNX17Q15036 470 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 PRAMEF19Q5SWL8 479 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 IL31Q6EBC2 164 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 RWDD4Q6NW29 188 aaKnown RBP18.55■□□□□ 0.56
PKD1-235ENST00000568591 PDZD4Q76G19 769 aaPredicted RBP18.55■□□□□ 0.56
PKD1-235ENST00000568591 BHLHA9Q7RTU4 235 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 TMEM102Q8N9M5 508 aaPredicted RBP18.55■□□□□ 0.56
PKD1-235ENST00000568591 GRIN3AQ8TCU5 1115 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 NTAN1Q96AB6 310 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 SIK2Q9H0K1 926 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 ACOT9Q9Y305 439 aa18.55■□□□□ 0.56
PKD1-235ENST00000568591 EPHX2P34913 555 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 RPL5P46777 297 aaKnown RBP18.54■□□□□ 0.56
PKD1-235ENST00000568591 SCAPQ12770 1279 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 PPIL2Q13356 520 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 FRG1Q14331 258 aaKnown RBP18.54■□□□□ 0.56
PKD1-235ENST00000568591 AMIGO2Q86SJ2 522 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 FAM110BQ8TC76 370 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 HEXDCQ8WVB3 486 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 TSNARE1Q96NA8 513 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 WDCPQ9H6R7 721 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 EFCAB1Q9HAE3 211 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 CHST12Q9NRB3 414 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 RBM47A0AV96 593 aaKnown RBP18.54■□□□□ 0.56
PKD1-235ENST00000568591 C7orf72A4D263 438 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 ERI2A8K979 691 aaKnown RBP18.54■□□□□ 0.56
PKD1-235ENST00000568591 E7ENX8 843 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 PCSK6P29122 969 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 PNPLA4P41247 253 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 C1QTNF8P60827 252 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 RAB10P61026 200 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 PTK2BQ14289 1009 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 RBM20Q5T481 1227 aaKnown RBP18.54■□□□□ 0.56
PKD1-235ENST00000568591 ITPRIPL1Q6GPH6 555 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 ARHGAP22Q7Z5H3 698 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 B4GALNT2Q8NHY0 566 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 EZH1Q92800 747 aaPredicted RBP18.54■□□□□ 0.56
PKD1-235ENST00000568591 DGCR14Q96DF8 476 aaKnown RBP18.54■□□□□ 0.56
PKD1-235ENST00000568591 POMKQ9H5K3 350 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 NDFIP2Q9NV92 336 aa18.54■□□□□ 0.56
PKD1-235ENST00000568591 MAGEB16A2A368 324 aa18.53■□□□□ 0.56
PKD1-235ENST00000568591 KCNE1P15382 129 aa18.53■□□□□ 0.56
PKD1-235ENST00000568591 TSPAN8P19075 237 aa18.53■□□□□ 0.56
PKD1-235ENST00000568591 ARCN1P48444 511 aaKnown RBP18.53■□□□□ 0.56
PKD1-235ENST00000568591 DENND5AQ6IQ26 1287 aa18.53■□□□□ 0.56
PKD1-235ENST00000568591 LAYNQ6UX15 382 aa18.53■□□□□ 0.56
PKD1-235ENST00000568591 FAM35AQ86V20 835 aa18.53■□□□□ 0.56
PKD1-235ENST00000568591 ELMO2Q96JJ3 720 aa18.53■□□□□ 0.56
PKD1-235ENST00000568591 SLC9A7Q96T83 725 aa18.53■□□□□ 0.56
PKD1-235ENST00000568591 FICDQ9BVA6 458 aa18.53■□□□□ 0.56
PKD1-235ENST00000568591 RBM38Q9H0Z9 239 aaKnown RBP18.53■□□□□ 0.56
PKD1-235ENST00000568591 TRHDEQ9UKU6 1024 aa18.53■□□□□ 0.56
PKD1-235ENST00000568591 RAB26Q9ULW5 256 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms