RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 MFN1Q8IWA4 741 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 BBS7Q8IWZ6 715 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 LRRC34Q8IZ02 419 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 TDRD5Q8NAT2 981 aaKnown RBP7.16□□□□□ -1.26
SMG1-215ENST00000568239 ADAMTS19Q8TE59 1207 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 TCEAL4Q96EI5 215 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 SLC46A2Q9BY10 475 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 PCMTD2Q9NV79 361 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 SOX13Q9UN79 622 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 LZTS1Q9Y250 596 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 RWDD3Q9Y3V2 267 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 IRAK3Q9Y616 596 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 CHD9Q3L8U1 2897 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 ZCWPW2A0A1B0GU75 182 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 E2F8A0AVK6 867 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 ILVBLA1L0T0 632 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 EBAG9O00559 213 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 MUSKO15146 869 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 PRPF4O43172 522 aaKnown RBP eCLIP7.16□□□□□ -1.26
SMG1-215ENST00000568239 TYROBPO43914 113 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 SAT1P21673 171 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 ADRA1DP25100 572 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 HOXD9P28356 352 aaPredicted RBP7.16□□□□□ -1.26
SMG1-215ENST00000568239 MZF1P28698 734 aaPredicted RBP7.16□□□□□ -1.26
SMG1-215ENST00000568239 C5orf22Q49AR2 442 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 ESRP1Q6NXG1 681 aaKnown RBP7.16□□□□□ -1.26
SMG1-215ENST00000568239 PKN3Q6P5Z2 889 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 RANBP10Q6VN20 620 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 PACS1Q6VY07 963 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 FAM47EQ6ZV65 393 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 STRA8Q7Z7C7 330 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 SETD3Q86TU7 594 aaPredicted RBP7.16□□□□□ -1.26
SMG1-215ENST00000568239 CCDC117Q8IWD4 279 aaPredicted RBP7.16□□□□□ -1.26
SMG1-215ENST00000568239 NDUFAF2Q8N183 169 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 HJURPQ8NCD3 748 aaPredicted RBP7.16□□□□□ -1.26
SMG1-215ENST00000568239 PDCD6IPQ8WUM4 868 aaKnown RBP7.16□□□□□ -1.26
SMG1-215ENST00000568239 FAM111AQ96PZ2 611 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 SLC17A7Q9P2U7 560 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 SEPT3Q9UH03 358 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 ZNF180Q9UJW8 692 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 OBSL1O75147 1896 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 MTCL1Q9Y4B5 1905 aaKnown RBP7.15□□□□□ -1.26
SMG1-215ENST00000568239 KDELR3O43731 214 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 RHOP08100 348 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 ITGA2BP08514 1039 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 SERPINF2P08697 491 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 PIRTP0C851 137 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 SERPINB9P50453 376 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 HNRNPH2P55795 449 aaKnown RBP7.15□□□□□ -1.26
SMG1-215ENST00000568239 IRX4P78413 519 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 NTHL1P78549 312 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 GALNT3Q14435 633 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 TEAD2Q15562 447 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 CNGA3Q16281 694 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 GKAP1Q5VSY0 366 aaPredicted RBP7.15□□□□□ -1.26
SMG1-215ENST00000568239 DENND5AQ6IQ26 1287 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 CXorf57Q6NSI4 855 aaKnown RBP7.15□□□□□ -1.26
SMG1-215ENST00000568239 MARK2Q7KZI7 788 aaKnown RBP7.15□□□□□ -1.26
SMG1-215ENST00000568239 CHST9Q7L1S5 443 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 TEX26Q8N6G2 289 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 OTUD6BQ8N6M0 293 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 PAF1Q8N7H5 531 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 BANPQ8N9N5 519 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 BLOC1S5Q8TDH9 187 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 CKAP2Q8WWK9 683 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 ALKBH8Q96BT7 664 aaKnown RBP7.15□□□□□ -1.26
SMG1-215ENST00000568239 LRRC3Q9BY71 257 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 VPS45Q9NRW7 570 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 FGFR1OP2Q9NVK5 253 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 HAUS2Q9NVX0 235 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 SLC2A6Q9UGQ3 507 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 CCL26Q9Y258 94 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 SZT2Q5T011 3432 aa7.15□□□□□ -1.26
SMG1-215ENST00000568239 LEFTY2O00292 366 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 BUD23O43709 281 aaKnown RBP7.15□□□□□ -1.27
SMG1-215ENST00000568239 ZWINTO95229 277 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 LUC7L3O95232 432 aaKnown RBP7.15□□□□□ -1.27
SMG1-215ENST00000568239 OLFM2O95897 454 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 SLC4A1P02730 911 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 PRKCGP05129 697 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 MMP2P08253 660 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 PTPN2P17706 415 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 ADRA1AP35348 466 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 GP5P40197 560 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 CSKP41240 450 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 SERPINH1P50454 418 aaKnown RBP7.15□□□□□ -1.27
SMG1-215ENST00000568239 CAMK1Q14012 370 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 IHHQ14623 411 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 CBX2Q14781 532 aaPredicted RBP7.15□□□□□ -1.27
SMG1-215ENST00000568239 SHHQ15465 462 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 POTEHQ6S545 545 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 KDELC1Q6UW63 502 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 CYS1Q717R9 158 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 GRASPQ7Z6J2 395 aaPredicted RBP7.15□□□□□ -1.27
SMG1-215ENST00000568239 CCDC63Q8NA47 563 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 ARRDC2Q8TBH0 407 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 WFDC5Q8TCV5 224 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 LRRC8CQ8TDW0 803 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 SH3RF2Q8TEC5 729 aa7.15□□□□□ -1.27
SMG1-215ENST00000568239 ING5Q8WYH8 240 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms