RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-215	ENST00000566682	CYP2U1	Q7Z449	544 aa		13.9	□□□□□ -0.18
SPG7-215	ENST00000566682	PIGK	Q92643	395 aa		13.9	□□□□□ -0.18
SPG7-215	ENST00000566682	FOXJ1	Q92949	421 aa		13.9	□□□□□ -0.18
SPG7-215	ENST00000566682	FAM131C	Q96AQ9	280 aa		13.9	□□□□□ -0.18
SPG7-215	ENST00000566682	VOPP1	Q96AW1	172 aa		13.9	□□□□□ -0.18
SPG7-215	ENST00000566682	ARRDC3	Q96B67	414 aa		13.9	□□□□□ -0.18
SPG7-215	ENST00000566682	HSPA12B	Q96MM6	686 aa		13.9	□□□□□ -0.18
SPG7-215	ENST00000566682	GDAP1L1	Q96MZ0	367 aa		13.9	□□□□□ -0.18
SPG7-215	ENST00000566682	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.9	□□□□□ -0.18
SPG7-215	ENST00000566682	TMEM74B	Q9NUR3	256 aa		13.9	□□□□□ -0.18
SPG7-215	ENST00000566682	EVL	Q9UI08	416 aa	Predicted RBP	13.9	□□□□□ -0.18
SPG7-215	ENST00000566682	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
SPG7-215	ENST00000566682	GPR179	Q6PRD1	2367 aa		13.9	□□□□□ -0.18
SPG7-215	ENST00000566682	GRID2IP	A4D2P6	1211 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	FAM47DP	A6NHR8	397 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	PEX11B	O96011	259 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	MAOB	P27338	520 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	MPL	P40238	635 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	GARS	P41250	739 aa	Known RBP	13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	PI4KA	P42356	2102 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	CDKN2B	P42772	138 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	GBE1	Q04446	702 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	RAD51	Q06609	339 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	SLC10A7	Q0GE19	358 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	GALNT2	Q10471	571 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	SLC10A2	Q12908	348 aa	Predicted RBP	13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	RFTN1	Q14699	578 aa	Predicted RBP	13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	LBR	Q14739	615 aa	Known RBP	13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	PLA2G2C	Q5R387	149 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	DCAF12L1	Q5VU92	463 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	SLC9A4	Q6AI14	798 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	LRRC49	Q8IUZ0	686 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	KATNAL2	Q8IYT4	538 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	RCOR2	Q8IZ40	523 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	RGL4	Q8IZJ4	473 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	ATPAF2	Q8N5M1	289 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	PLD5	Q8N7P1	536 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	LRRC57	Q8N9N7	239 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	TSEN2	Q8NCE0	465 aa	Known RBP	13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	OR14C36	Q8NHC7	312 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	KRT35	Q92764	455 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	LRIG1	Q96JA1	1093 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	EXOC2	Q96KP1	924 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	ZNF599	Q96NL3	588 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	PCED1A	Q9H1Q7	454 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	PARD6A	Q9NPB6	346 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	DYRK4	Q9NR20	520 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	SEMA4G	Q9NTN9	838 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	DTL	Q9NZJ0	730 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	PCDHA3	Q9Y5H8	950 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	DOCK9	Q9BZ29	2069 aa		13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	ATXN2	Q99700	1313 aa	Known RBP	13.89	□□□□□ -0.19
SPG7-215	ENST00000566682	MEI4	A8MW99	385 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	APOL1	O14791	398 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	INSIG1	O15503	277 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	SLC7A4	O43246	635 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	KRT86	O43790	486 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	NRDC	O43847	1150 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	LRP3	O75074	770 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	ZNF806	P0C7X5	589 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	KRT10	P13645	584 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	CTNNA1	P35221	906 aa	Known RBP	13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	RGR	P47804	291 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	ADPRH	P54922	357 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	LLGL1	Q15334	1064 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	TAZ	Q16635	292 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	SYCP2L	Q5T4T6	812 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	PIP5KL1	Q5T9C9	394 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	TMCO4	Q5TGY1	634 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	AGBL4	Q5VU57	503 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	NCEH1	Q6PIU2	408 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	SPOCD1	Q6ZMY3	1216 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	NT5DC3	Q86UY8	548 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	RFX6	Q8HWS3	928 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	SYT12	Q8IV01	421 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	RNF10	Q8N5U6	811 aa	Known RBP	13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	OR2T34	Q8NGX1	318 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	EXD1	Q8NHP7	514 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	ANP32B	Q92688	251 aa	Known RBP	13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	PPP1R16A	Q96I34	528 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	CINP	Q9BW66	212 aa	Predicted RBP	13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	CPEB1	Q9BZB8	566 aa	Known RBP	13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	TSGA10	Q9BZW7	698 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	SMOC1	Q9H4F8	434 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	PILRB	Q9UKJ0	227 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	AMFR	Q9UKV5	643 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	GUCA1B	Q9UMX6	200 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	HEY1	Q9Y5J3	304 aa		13.88	□□□□□ -0.19
SPG7-215	ENST00000566682	FAM186A	A6NE01	2351 aa		13.87	□□□□□ -0.19
SPG7-215	ENST00000566682	TBC1D3D	A0A087WVF3	549 aa		13.87	□□□□□ -0.19
SPG7-215	ENST00000566682	TBC1D3I	A0A087WXS9	549 aa		13.87	□□□□□ -0.19
SPG7-215	ENST00000566682	TBC1D3E	A0A087X179	549 aa		13.87	□□□□□ -0.19
SPG7-215	ENST00000566682	TBC1D3K	A0A087X1G2	549 aa		13.87	□□□□□ -0.19
SPG7-215	ENST00000566682	CCDC66	A2RUB6	948 aa		13.87	□□□□□ -0.19
SPG7-215	ENST00000566682	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.87	□□□□□ -0.19
SPG7-215	ENST00000566682	LRRC72	A6NJI9	287 aa		13.87	□□□□□ -0.19
SPG7-215	ENST00000566682	TBC1D3L	B9A6J9	549 aa		13.87	□□□□□ -0.19
SPG7-215	ENST00000566682	MUSK	O15146	869 aa		13.87	□□□□□ -0.19

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