RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 OR2AP1Q8NGE2 309 aa28.15■■■□□ 2.1
UBFD1-206ENST00000566669 BAP1Q92560 729 aa28.15■■■□□ 2.1
UBFD1-206ENST00000566669 SELENOOQ9BVL4 669 aa28.15■■■□□ 2.1
UBFD1-206ENST00000566669 ARID1BQ8NFD5 2236 aaPredicted RBP28.15■■■□□ 2.1
UBFD1-206ENST00000566669 RRP8O43159 456 aaKnown RBP28.14■■■□□ 2.1
UBFD1-206ENST00000566669 LRIG2O94898 1065 aa28.14■■■□□ 2.1
UBFD1-206ENST00000566669 CCDC172P0C7W6 258 aa28.14■■■□□ 2.1
UBFD1-206ENST00000566669 CHRNB2P17787 502 aa28.14■■■□□ 2.1
UBFD1-206ENST00000566669 ABCG1P45844 678 aa28.14■■■□□ 2.1
UBFD1-206ENST00000566669 MAPK8IP2Q13387 824 aaPredicted RBP28.14■■■□□ 2.1
UBFD1-206ENST00000566669 C15orf59Q2T9L4 293 aaPredicted RBP28.14■■■□□ 2.1
UBFD1-206ENST00000566669 LRRC69Q6ZNQ3 347 aa28.14■■■□□ 2.1
UBFD1-206ENST00000566669 PTAR1Q7Z6K3 402 aaPredicted RBP28.14■■■□□ 2.1
UBFD1-206ENST00000566669 RYBPQ8N488 228 aaPredicted RBP28.14■■■□□ 2.1
UBFD1-206ENST00000566669 NEK11Q8NG66 645 aa28.14■■■□□ 2.1
UBFD1-206ENST00000566669 SLC30A5Q8TAD4 765 aa28.14■■■□□ 2.1
UBFD1-206ENST00000566669 FAM172AQ8WUF8 416 aa28.14■■■□□ 2.1
UBFD1-206ENST00000566669 C1QTNF2Q9BXJ5 285 aa28.14■■■□□ 2.1
UBFD1-206ENST00000566669 FZD3Q9NPG1 666 aa28.14■■■□□ 2.1
UBFD1-206ENST00000566669 NLRC4Q9NPP4 1024 aa28.14■■■□□ 2.1
UBFD1-206ENST00000566669 SIK3Q9Y2K2 1263 aa28.14■■■□□ 2.1
UBFD1-206ENST00000566669 CSNK1G3Q9Y6M4 447 aa28.14■■■□□ 2.1
UBFD1-206ENST00000566669 SPTY2D1-AS1A0A0U1RR47 76 aa28.13■■■□□ 2.09
UBFD1-206ENST00000566669 NEMP1O14524 444 aa28.13■■■□□ 2.09
UBFD1-206ENST00000566669 SCAMP1O15126 338 aa28.13■■■□□ 2.09
UBFD1-206ENST00000566669 CD160O95971 181 aa28.13■■■□□ 2.09
UBFD1-206ENST00000566669 PAK4O96013 591 aaPredicted RBP28.13■■■□□ 2.09
UBFD1-206ENST00000566669 INSM1Q01101 510 aaPredicted RBP28.13■■■□□ 2.09
UBFD1-206ENST00000566669 PPP1R2P3Q6NXS1 205 aa28.13■■■□□ 2.09
UBFD1-206ENST00000566669 RBM43Q6ZSC3 357 aaKnown RBP28.13■■■□□ 2.09
UBFD1-206ENST00000566669 PARS2Q7L3T8 475 aaKnown RBP28.13■■■□□ 2.09
UBFD1-206ENST00000566669 SLFN11Q7Z7L1 901 aa28.13■■■□□ 2.09
UBFD1-206ENST00000566669 PARGQ86W56 976 aa28.13■■■□□ 2.09
UBFD1-206ENST00000566669 TM6SF2Q9BZW4 377 aa28.13■■■□□ 2.09
UBFD1-206ENST00000566669 DNAI1Q9UI46 699 aa28.13■■■□□ 2.09
UBFD1-206ENST00000566669 C16orf96A6NNT2 1141 aa28.12■■■□□ 2.09
UBFD1-206ENST00000566669 TOR1BO14657 336 aa28.12■■■□□ 2.09
UBFD1-206ENST00000566669 KDELR3O43731 214 aa28.12■■■□□ 2.09
UBFD1-206ENST00000566669 GPD1P21695 349 aa28.12■■■□□ 2.09
UBFD1-206ENST00000566669 ACVRL1P37023 503 aa28.12■■■□□ 2.09
UBFD1-206ENST00000566669 HDAC4P56524 1084 aa28.12■■■□□ 2.09
UBFD1-206ENST00000566669 CLDN2P57739 230 aa28.12■■■□□ 2.09
UBFD1-206ENST00000566669 YBEYP58557 167 aaPredicted RBP28.12■■■□□ 2.09
UBFD1-206ENST00000566669 ACAP1Q15027 740 aa28.12■■■□□ 2.09
UBFD1-206ENST00000566669 CLEC16AQ2KHT3 1053 aa28.12■■■□□ 2.09
UBFD1-206ENST00000566669 INO80DQ53TQ3 878 aaPredicted RBP28.12■■■□□ 2.09
UBFD1-206ENST00000566669 SLC22A18ASQ8N1D0 253 aa28.12■■■□□ 2.09
UBFD1-206ENST00000566669 GPT2Q8TD30 523 aa28.12■■■□□ 2.09
UBFD1-206ENST00000566669 BMFQ96LC9 184 aa28.12■■■□□ 2.09
UBFD1-206ENST00000566669 PCMTD1Q96MG8 357 aaPredicted RBP28.12■■■□□ 2.09
UBFD1-206ENST00000566669 C1QTNF7Q9BXJ2 289 aa28.12■■■□□ 2.09
UBFD1-206ENST00000566669 LMBRD1Q9NUN5 540 aa28.12■■■□□ 2.09
UBFD1-206ENST00000566669 ANO10Q9NW15 660 aa28.12■■■□□ 2.09
UBFD1-206ENST00000566669 DNAJC28Q9NX36 388 aa28.12■■■□□ 2.09
UBFD1-206ENST00000566669 IPO11Q9UI26 975 aaKnown RBP28.12■■■□□ 2.09
UBFD1-206ENST00000566669 IGSF10Q6WRI0 2623 aa28.11■■■□□ 2.09
UBFD1-206ENST00000566669 SIGLEC16A6NMB1 481 aa28.11■■■□□ 2.09
UBFD1-206ENST00000566669 CSF2P04141 144 aa28.11■■■□□ 2.09
UBFD1-206ENST00000566669 NME1P15531 152 aaKnown RBP28.11■■■□□ 2.09
UBFD1-206ENST00000566669 HTR7P34969 479 aa28.11■■■□□ 2.09
UBFD1-206ENST00000566669 RFC1P35251 1148 aaPredicted RBP28.11■■■□□ 2.09
UBFD1-206ENST00000566669 SUOXP51687 545 aa28.11■■■□□ 2.09
UBFD1-206ENST00000566669 C1QBPQ07021 282 aaKnown RBP28.11■■■□□ 2.09
UBFD1-206ENST00000566669 PTP4A2Q12974 167 aa28.11■■■□□ 2.09
UBFD1-206ENST00000566669 PTK2BQ14289 1009 aa28.11■■■□□ 2.09
UBFD1-206ENST00000566669 MYLK3Q32MK0 819 aa28.11■■■□□ 2.09
UBFD1-206ENST00000566669 EFHC2Q5JST6 749 aa28.11■■■□□ 2.09
UBFD1-206ENST00000566669 JOSD2Q8TAC2 188 aa28.11■■■□□ 2.09
UBFD1-206ENST00000566669 SNIP1Q8TAD8 396 aaKnown RBP28.11■■■□□ 2.09
UBFD1-206ENST00000566669 BTN2A2Q8WVV5 523 aa28.11■■■□□ 2.09
UBFD1-206ENST00000566669 GDAP1L1Q96MZ0 367 aa28.11■■■□□ 2.09
UBFD1-206ENST00000566669 FANCLQ9NW38 375 aa28.11■■■□□ 2.09
UBFD1-206ENST00000566669 UCKL1Q9NWZ5 548 aa28.11■■■□□ 2.09
UBFD1-206ENST00000566669 LIMA1Q9UHB6 759 aaKnown RBP28.11■■■□□ 2.09
UBFD1-206ENST00000566669 LGALS16A8MUM7 142 aa28.1■■■□□ 2.09
UBFD1-206ENST00000566669 RNF103O00237 685 aa28.1■■■□□ 2.09
UBFD1-206ENST00000566669 KRIT1O00522 736 aa28.1■■■□□ 2.09
UBFD1-206ENST00000566669 FFAR2O15552 330 aa28.1■■■□□ 2.09
UBFD1-206ENST00000566669 ACTN2P35609 894 aa28.1■■■□□ 2.09
UBFD1-206ENST00000566669 EIF2S3P41091 472 aaKnown RBP28.1■■■□□ 2.09
UBFD1-206ENST00000566669 MYL5Q02045 173 aa28.1■■■□□ 2.09
UBFD1-206ENST00000566669 SEMG2Q02383 582 aa28.1■■■□□ 2.09
UBFD1-206ENST00000566669 COL9A2Q14055 689 aaPredicted RBP28.1■■■□□ 2.09
UBFD1-206ENST00000566669 ZCCHC8Q6NZY4 707 aaKnown RBP28.1■■■□□ 2.09
UBFD1-206ENST00000566669 SASS6Q6UVJ0 657 aa28.1■■■□□ 2.09
UBFD1-206ENST00000566669 RTL3Q8N8U3 475 aaKnown RBP28.1■■■□□ 2.09
UBFD1-206ENST00000566669 EPAS1Q99814 870 aa28.1■■■□□ 2.09
UBFD1-206ENST00000566669 CATSPERBQ9H7T0 1116 aa28.1■■■□□ 2.09
UBFD1-206ENST00000566669 NEU3Q9UQ49 428 aa28.1■■■□□ 2.09
UBFD1-206ENST00000566669 TRPM6Q9BX84 2022 aa28.09■■■□□ 2.09
UBFD1-206ENST00000566669 LRRC10BA6NIK2 292 aa28.09■■■□□ 2.09
UBFD1-206ENST00000566669 FAM72CH0Y354 149 aa28.09■■■□□ 2.09
UBFD1-206ENST00000566669 MT-CO3P00414 261 aa28.09■■■□□ 2.09
UBFD1-206ENST00000566669 KLK7P49862 253 aa28.09■■■□□ 2.09
UBFD1-206ENST00000566669 ZNF143P52747 638 aaPredicted RBP28.09■■■□□ 2.09
UBFD1-206ENST00000566669 COPB1P53618 953 aaKnown RBP28.09■■■□□ 2.09
UBFD1-206ENST00000566669 FZD2Q14332 565 aa28.09■■■□□ 2.09
UBFD1-206ENST00000566669 GRM3Q14832 879 aa28.09■■■□□ 2.09
UBFD1-206ENST00000566669 PARP15Q460N3 678 aa28.09■■■□□ 2.09
UBFD1-206ENST00000566669 FAM72AQ5TYM5 149 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms