RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 ACACAQ13085 2346 aa20.52■□□□□ 0.87
CLN6-207ENST00000566347 KNTC1P50748 2209 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 SMTNL1A8MU46 457 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 TAF4O00268 1085 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 ACADVLP49748 655 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 RPL7AP62424 266 aaKnown RBP20.51■□□□□ 0.87
CLN6-207ENST00000566347 DNAJC3Q13217 504 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 ILKQ13418 452 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 PPP1R15BQ5SWA1 713 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 IRF2BP2Q7Z5L9 587 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 ABI3BPQ7Z7G0 1075 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 DCP2Q8IU60 420 aaKnown RBP20.51■□□□□ 0.87
CLN6-207ENST00000566347 MCOLN2Q8IZK6 566 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 CASKIN2Q8WXE0 1202 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 TSC1Q92574 1164 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 VCPIP1Q96JH7 1222 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 CALN1Q9BXU9 219 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 SLC17A9Q9BYT1 436 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 CATSPERBQ9H7T0 1116 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 TMEM63CQ9P1W3 806 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 DKK4Q9UBT3 224 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 FZD10Q9ULW2 581 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 HS3ST3A1Q9Y663 406 aa20.51■□□□□ 0.87
CLN6-207ENST00000566347 A6NNZ2 444 aa20.5■□□□□ 0.87
CLN6-207ENST00000566347 KRIT1O00522 736 aa20.5■□□□□ 0.87
CLN6-207ENST00000566347 TSPAN6O43657 245 aa20.5■□□□□ 0.87
CLN6-207ENST00000566347 POP4O95707 220 aaKnown RBP20.5■□□□□ 0.87
CLN6-207ENST00000566347 TNFAIP3P21580 790 aa20.5■□□□□ 0.87
CLN6-207ENST00000566347 HNF1BP35680 557 aa20.5■□□□□ 0.87
CLN6-207ENST00000566347 YBEYP58557 167 aaPredicted RBP20.5■□□□□ 0.87
CLN6-207ENST00000566347 MAPK8IP2Q13387 824 aaPredicted RBP20.5■□□□□ 0.87
CLN6-207ENST00000566347 FILIP1LQ4L180 1135 aa20.5■□□□□ 0.87
CLN6-207ENST00000566347 ZNF805Q5CZA5 627 aa20.5■□□□□ 0.87
CLN6-207ENST00000566347 GCNT7Q6ZNI0 430 aa20.5■□□□□ 0.87
CLN6-207ENST00000566347 ZNF354CQ86Y25 554 aa20.5■□□□□ 0.87
CLN6-207ENST00000566347 PYROXD2Q8N2H3 581 aa20.5■□□□□ 0.87
CLN6-207ENST00000566347 PDCD7Q8N8D1 485 aaKnown RBP20.5■□□□□ 0.87
CLN6-207ENST00000566347 OR13H1Q8NG92 308 aa20.5■□□□□ 0.87
CLN6-207ENST00000566347 MDM1Q8TC05 714 aa20.5■□□□□ 0.87
CLN6-207ENST00000566347 ARHGEF26Q96DR7 871 aa20.5■□□□□ 0.87
CLN6-207ENST00000566347 IFT43Q96FT9 208 aa20.5■□□□□ 0.87
CLN6-207ENST00000566347 RTN4Q9NQC3 1192 aaKnown RBP20.5■□□□□ 0.87
CLN6-207ENST00000566347 DONSONQ9NYP3 566 aa20.5■□□□□ 0.87
CLN6-207ENST00000566347 FAM149AA5PLN7 773 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 C16orf96A6NNT2 1141 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 WASH4PA8MWX3 477 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 FGF10O15520 208 aaPredicted RBP20.49■□□□□ 0.87
CLN6-207ENST00000566347 TEX33O43247 280 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 BUB1O43683 1085 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 CREB3O43889 395 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 SDC3O75056 442 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 CKMT2P17540 419 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 HTR7P34969 479 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 CLDN2P57739 230 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 RAD51Q06609 339 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 CAMK2BQ13554 666 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 MYLK3Q32MK0 819 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 PARP15Q460N3 678 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 HS1BP3Q53T59 392 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 INO80DQ53TQ3 878 aaPredicted RBP20.49■□□□□ 0.87
CLN6-207ENST00000566347 OR6K2Q8NGY2 324 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 BAP1Q92560 729 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 GDAP1L1Q96MZ0 367 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 SYT11Q9BT88 431 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 PARVAQ9NVD7 372 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 APC2O95996 2303 aa20.49■□□□□ 0.87
CLN6-207ENST00000566347 TRABD2BA6NFA1 517 aa20.48■□□□□ 0.87
CLN6-207ENST00000566347 NEMP1O14524 444 aa20.48■□□□□ 0.87
CLN6-207ENST00000566347 TMCC1O94876 653 aa20.48■□□□□ 0.87
CLN6-207ENST00000566347 PAK4O96013 591 aaPredicted RBP20.48■□□□□ 0.87
CLN6-207ENST00000566347 UGT2B4P06133 528 aa20.48■□□□□ 0.87
CLN6-207ENST00000566347 DGKAP23743 735 aa20.48■□□□□ 0.87
CLN6-207ENST00000566347 SGCGQ13326 291 aa20.48■□□□□ 0.87
CLN6-207ENST00000566347 ZNF211Q13398 564 aaPredicted RBP20.48■□□□□ 0.87
CLN6-207ENST00000566347 KYAT3Q6YP21 454 aaKnown RBP20.48■□□□□ 0.87
CLN6-207ENST00000566347 LEKR1Q6ZMV7 388 aa20.48■□□□□ 0.87
CLN6-207ENST00000566347 Q6ZSR6 202 aa20.48■□□□□ 0.87
CLN6-207ENST00000566347 TMC6Q7Z403 805 aa20.48■□□□□ 0.87
CLN6-207ENST00000566347 PTAR1Q7Z6K3 402 aaPredicted RBP20.48■□□□□ 0.87
CLN6-207ENST00000566347 MARCH9Q86YJ5 346 aa20.48■□□□□ 0.87
CLN6-207ENST00000566347 LENG8Q96PV6 779 aaPredicted RBP20.48■□□□□ 0.87
CLN6-207ENST00000566347 NOL6Q9H6R4 1146 aaKnown RBP20.48■□□□□ 0.87
CLN6-207ENST00000566347 ZFYVE26Q68DK2 2539 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 LRRC53A6NM62 1247 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 RASA4BC9J798 803 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 RASA4O43374 803 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 IGSF6O95976 241 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 JUPP14923 745 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 GKP32189 559 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 FGL2Q14314 439 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 ASIC2Q16515 512 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 PROX2Q3B8N5 592 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 GDPD4Q6W3E5 623 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 SLC22A18ASQ8N1D0 253 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 UMODL1-AS1Q8N2C9 162 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 SLC25A45Q8N413 288 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 OR4C6Q8NH72 309 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 ASB12Q8WXK4 309 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 C1QTNF2Q9BXJ5 285 aa20.47■□□□□ 0.87
CLN6-207ENST00000566347 TTYH3Q9C0H2 523 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms