RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 BRD8Q9H0E9 1235 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 ACSS3Q9H6R3 686 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 PRDM16Q9HAZ2 1276 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 RXFP1Q9HBX9 757 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 NT5MQ9NPB1 228 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 TMEM248Q9NWD8 314 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 COMMD8Q9NX08 183 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 PLK2Q9NYY3 685 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 FNIP2Q9P278 1114 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 CCL26Q9Y258 94 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 HCFC2Q9Y5Z7 792 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 A0A0C4DFX4 3053 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 TMEM120BA0PK00 339 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 HMX2A2RU54 273 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 WASH4PA8MWX3 477 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 F5H5T6 163 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 EIF3HO15372 352 aaKnown RBP eCLIP6.33□□□□□ -1.46e-6■■■■□ 25.8
CHD9-217ENST00000565832 GREM1O60565 184 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 SHOX2O60902 331 aaPredicted RBP6.33□□□□□ -1.4
CHD9-217ENST00000565832 AP2A1O95782 977 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 CPP00450 1065 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 CA3P07451 260 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 ERVK-10P10266 1014 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 MYL4P12829 197 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 BRAFP15056 766 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 EPCAMP16422 314 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 KRT15P19012 456 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 KRT4P19013 534 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 GMPRP36959 345 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 NTHL1P78549 312 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 COG7P83436 770 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 NRG1Q02297 640 aaPredicted RBP6.33□□□□□ -1.4
CHD9-217ENST00000565832 NIPAL4Q0D2K0 466 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 CBX2Q14781 532 aaPredicted RBP6.33□□□□□ -1.4
CHD9-217ENST00000565832 SHHQ15465 462 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 ADGRF1Q5T601 910 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 NUGGCQ68CJ6 796 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 C4orf22Q6V702 233 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 PPP1R21Q6ZMI0 780 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 ZNF771Q7L3S4 317 aaPredicted RBP6.33□□□□□ -1.4
CHD9-217ENST00000565832 IPMKQ8NFU5 416 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 GDAP1Q8TB36 358 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 TRMT2BQ96GJ1 504 aaKnown RBP6.33□□□□□ -1.4
CHD9-217ENST00000565832 NSMCE3Q96MG7 304 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 IL12RB2Q99665 862 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 FERMT1Q9BQL6 677 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 SLC46A2Q9BY10 475 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 GBA3Q9H227 469 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 PPARGC1AQ9UBK2 798 aaKnown RBP6.33□□□□□ -1.4
CHD9-217ENST00000565832 TRHDEQ9UKU6 1024 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 CLEC4EQ9ULY5 219 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 HBS1LQ9Y450 684 aaKnown RBP6.33□□□□□ -1.4
CHD9-217ENST00000565832 PSAT1Q9Y617 370 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 RAD54BQ9Y620 910 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 CPQQ9Y646 472 aa6.33□□□□□ -1.4
CHD9-217ENST00000565832 DENND4CQ5VZ89 1909 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 BRWD1Q9NSI6 2320 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 RAMP2O60895 175 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 BMP2P12643 396 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 BMP1P13497 986 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 PHBP35232 272 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 RPA3P35244 121 aaPredicted RBP6.32□□□□□ -1.4
CHD9-217ENST00000565832 MSH2P43246 934 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 ABCG1P45844 678 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 SLC11A2P49281 568 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 CLCN4P51793 760 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 ZNF135P52742 658 aaPredicted RBP6.32□□□□□ -1.4
CHD9-217ENST00000565832 NDST2P52849 883 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 PGGT1BP53609 377 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 DSC2Q02487 901 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 SERINC3Q13530 473 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 BMPR2Q13873 1038 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 POU6F1Q14863 301 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 DENND5AQ6IQ26 1287 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 LINGO4Q6UY18 593 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 PRICKLE2Q7Z3G6 844 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 TADA2BQ86TJ2 420 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 TRABD2AQ86V40 505 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 TMC8Q8IU68 726 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 SLC25A41Q8N5S1 370 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 LZTR1Q8N653 840 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 PDZD8Q8NEN9 1154 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 RIN3Q8TB24 985 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 WFDC5Q8TCV5 224 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 AZIN2Q96A70 460 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 STAMBPL1Q96FJ0 436 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 SERAC1Q96JX3 654 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 EXOC2Q96KP1 924 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 CITED4Q96RK1 184 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 CYTH2Q99418 400 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 AGAP2Q99490 1192 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 DHRS4Q9BTZ2 278 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 GLOD4Q9HC38 313 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 PSD3Q9NYI0 1048 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 HSFX1Q9UBD0 423 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 LGALS13Q9UHV8 139 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 RPS6KL1Q9Y6S9 549 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 OBSL1O75147 1896 aa6.32□□□□□ -1.4
CHD9-217ENST00000565832 MTCL1Q9Y4B5 1905 aaKnown RBP6.32□□□□□ -1.4
CHD9-217ENST00000565832 CHD5Q8TDI0 1954 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms