RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 ZDHHC24Q6UX98 284 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 LINGO4Q6UY18 593 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 CCNI2Q6ZMN8 369 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-205ENST00000564899 PCGF5Q86SE9 256 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 C12orf40Q86WS4 652 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 AHI1Q8N157 1196 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 BBS5Q8N3I7 341 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 TEX26Q8N6G2 289 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 CNTD1Q8N815 330 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.27□□□□□ -0.61
SF3B3-205ENST00000564899 TTC8Q8TAM2 541 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 ACDQ96AP0 544 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 ZNF419Q96HQ0 510 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-205ENST00000564899 FAM129AQ9BZQ8 928 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 BRD9Q9H8M2 597 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 ANAPC5Q9UJX4 755 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 FBXO10Q9UK96 956 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 INTS6Q9UL03 887 aaKnown RBP11.27□□□□□ -0.61
SF3B3-205ENST00000564899 TPX2Q9ULW0 747 aaKnown RBP11.27□□□□□ -0.61
SF3B3-205ENST00000564899 NFU1Q9UMS0 254 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 ACTL7AQ9Y615 435 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 F5P12259 2224 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 KANSL1LA0AUZ9 987 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 OTOL1A6NHN0 477 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-205ENST00000564899 E7EVH7 732 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 TULP3O75386 442 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 MYBL2P10244 700 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 TARSP26639 723 aaKnown RBP11.26□□□□□ -0.61
SF3B3-205ENST00000564899 ECHS1P30084 290 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 CD68P34810 354 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-205ENST00000564899 GEMIN4P57678 1058 aaKnown RBP11.26□□□□□ -0.61
SF3B3-205ENST00000564899 CAV1Q03135 178 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 ITKQ08881 620 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 SEMA5AQ13591 1074 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 PRPSAP1Q14558 356 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 DMC1Q14565 340 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 RFTN1Q14699 578 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-205ENST00000564899 UBXN2BQ14CS0 331 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 MORF4L2Q15014 288 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 GAB4Q2WGN9 574 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 ITPRIPL2Q3MIP1 535 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 RNASEH2BQ5TBB1 312 aaKnown RBP11.26□□□□□ -0.61
SF3B3-205ENST00000564899 GRAMD4Q6IC98 578 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 HIBCHQ6NVY1 386 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-205ENST00000564899 ETFBKMTQ8IXQ9 262 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 PPIL6Q8IXY8 311 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 EIF1ADQ8N9N8 165 aaKnown RBP11.26□□□□□ -0.61
SF3B3-205ENST00000564899 ZBTB44Q8NCP5 570 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 WFIKKN2Q8TEU8 576 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 CPT1BQ92523 772 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 NELL1Q92832 810 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 ART4Q93070 314 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 EXOC4Q96A65 974 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 CINPQ9BW66 212 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-205ENST00000564899 NEUROG2Q9H2A3 272 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 ETNK1Q9HBU6 452 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 GLOD4Q9HC38 313 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 NT5MQ9NPB1 228 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 HAUS2Q9NVX0 235 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 GTSE1Q9NYZ3 720 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 SEPT3Q9UH03 358 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 SHOC2Q9UQ13 582 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 FARP1Q9Y4F1 1045 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-205ENST00000564899 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.26□□□□□ -0.61
SF3B3-205ENST00000564899 FAM208BQ5VWN6 2430 aa11.26□□□□□ -0.61
SF3B3-205ENST00000564899 NYNRINQ9P2P1 1898 aaKnown RBP11.25□□□□□ -0.61
SF3B3-205ENST00000564899 KIF26AQ9ULI4 1882 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-205ENST00000564899 IGF2RP11717 2491 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 FAM170BA6NMN3 283 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 ARNTLO00327 626 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 TRIM24O15164 1050 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 LAMTOR5O43504 91 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 LILRB5O75023 590 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 ERLIN1O75477 346 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 TMCC1O94876 653 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 APRTP07741 180 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 ADRB1P08588 477 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 CISD3P0C7P0 127 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 POLR2EP19388 210 aaKnown RBP11.25□□□□□ -0.61
SF3B3-205ENST00000564899 GJA4P35212 333 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 LMAN1P49257 510 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 SERPINH1P50454 418 aaKnown RBP11.25□□□□□ -0.61
SF3B3-205ENST00000564899 MAXP61244 160 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 KDSRQ06136 332 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 SULT2A1Q06520 285 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 FZD5Q13467 585 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 KCNJ11Q14654 390 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 BRD3Q15059 726 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 MLF2Q15773 248 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-205ENST00000564899 GEN1Q17RS7 908 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 MAP9Q49MG5 647 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 INO80DQ53TQ3 878 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-205ENST00000564899 ANKRD22Q5VYY1 191 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 MBLAC2Q68D91 279 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 KIAA0907Q7Z7F0 614 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-205ENST00000564899 HOOK3Q86VS8 718 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 NAT8LQ8N9F0 302 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 FBXO25Q8TCJ0 367 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 CSGALNACT1Q8TDX6 532 aa11.25□□□□□ -0.61
SF3B3-205ENST00000564899 PRCCQ92733 491 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms