RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 LY75O60449 1722 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SDHDO14521 159 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 COQ9O75208 318 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 DDHD2O94830 711 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 AHSGP02765 367 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 PROZP22891 400 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ALDH3B2P48448 385 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CSHL1Q14406 222 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 REP15Q6BDI9 236 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 GRAMD4Q6IC98 578 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 OTOP3Q7RTS5 596 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 LRRC43Q8N309 656 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 KDM1BQ8NB78 822 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SPATA22Q8NHS9 363 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 FZD8Q9H461 694 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ZNF232Q9UNY5 417 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 PTGDR2Q9Y5Y4 395 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 RGPD3A6NKT7 1758 aaPredicted RBP20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 RGPD4Q7Z3J3 1758 aa20.74■□□□□ 0.91
MAP1LC3B-206ENST00000564844 M0QYT0 321 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CLDN5O00501 218 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 KCNH1O95259 989 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ZNF182P17025 639 aaPredicted RBP20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ARF4P18085 180 aaPredicted RBP20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 NFKB1P19838 968 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 KCNA5P22460 613 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 GABRB3P28472 473 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 RHDQ02161 417 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 C1QTNF12Q5T7M4 302 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ZYG11AQ6WRX3 759 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CENPLQ8N0S6 344 aaPredicted RBP20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CACNA2D2Q9NY47 1150 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 AURKAO14965 403 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 NCAM1P13591 858 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CES1P23141 567 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 TRAF2Q12933 501 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SYPL2Q5VXT5 272 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CLEC14AQ86T13 490 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 TMEM110Q86TL2 294 aa20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 FBXO16Q8IX29 292 aaPredicted RBP20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 TXNDC5Q8NBS9 432 aaKnown RBP20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 MTF2Q9Y483 593 aaPredicted RBP20.73■□□□□ 0.91
MAP1LC3B-206ENST00000564844 TRIM43BA6NCK2 446 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ONECUT3O60422 494 aaPredicted RBP20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 MPOP05164 745 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SLC35E2BP0CK96 405 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 UGT1A1P22309 533 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 UGT1A4P22310 534 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 UGT1A3P35503 534 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 UGT1A5P35504 534 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 RBP5P82980 135 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 TXNL4AP83876 142 aaKnown RBP20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 NSUN2Q08J23 767 aaKnown RBP eCLIP20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CYS1Q717R9 158 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 PIGZQ86VD9 579 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 TTC16Q8NEE8 873 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SLC2A14Q8TDB8 520 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 LZICQ8WZA0 190 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 TRNAU1APQ9NX07 287 aaKnown RBP20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 MRASO14807 208 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 IL18RAPO95256 599 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 JCHAINP01591 159 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ATP6V1B2P21281 511 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 EEF1B2P24534 225 aaKnown RBP20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 PTPN3P26045 913 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 AARS2Q5JTZ9 985 aaKnown RBP20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 TBCELQ5QJ74 424 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 BORAQ6PGQ7 559 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 C4orf22Q6V702 233 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SPATA33Q96N06 139 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CYP3A43Q9HB55 503 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 TUBGCP4Q9UGJ1 667 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 IGKV6D-21A0A0A0MT36 114 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 K7EPI3 171 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 OCM2P0CE71 109 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 OCMP0CE72 109 aaPredicted RBP20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 LRPAP1P30533 357 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ADIGQ0VDE8 80 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 FBXO48Q5FWF7 155 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 Q6ZNX1 250 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SETD3Q86TU7 594 aaPredicted RBP20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 GPR180Q86V85 440 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 PSTKQ8IV42 348 aaKnown RBP20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SLC38A7Q9NVC3 462 aa20.72■□□□□ 0.91
MAP1LC3B-206ENST00000564844 EEF2KO00418 725 aaKnown RBP20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 UBDO15205 165 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 TADA2AO75478 443 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 MT-CYBP00156 380 aaPredicted RBP20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 PGK1P00558 417 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 GRM5P41594 1212 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 CLCN2P51788 898 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 C21orf59P57076 290 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ZBTB17Q13105 803 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 TGFBIQ15582 683 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 USP41Q3LFD5 358 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 ZIK1Q3SY52 487 aaPredicted RBP20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 TSTD2Q5T7W7 516 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 HFE2Q6ZVN8 426 aa20.71■□□□□ 0.91
MAP1LC3B-206ENST00000564844 SNX29P2Q8IUI4 249 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms