RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 KRIT1O00522 736 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 GIPC1O14908 333 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 VILLO15195 856 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 LATO43561 262 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 RNGTTO60942 597 aaKnown RBP18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 GJB3O75712 270 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 H2AFZP0C0S5 128 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 CD59P13987 128 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 ITGB7P26010 798 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 IL1R2P27930 398 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 CD38P28907 300 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 ARL4AP40617 200 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 SSR1P43307 286 aaKnown RBP18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 NEK3P51956 506 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 TAS2R38P59533 333 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 RHOAP61586 193 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 MYLK3Q32MK0 819 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 N4BP2L1Q5TBK1 243 aaPredicted RBP18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 NEK5Q6P3R8 708 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 LAYNQ6UX15 382 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 H2AFVQ71UI9 128 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 OR6K2Q8NGY2 324 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 ZNF564Q8TBZ8 553 aaPredicted RBP18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 CTNNBL1Q8WYA6 563 aaPredicted RBP18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 SLC39A8Q9C0K1 460 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 IL21RQ9HBE5 538 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 TM7SF3Q9NS93 570 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 CWC15Q9P013 229 aaKnown RBP18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 CTTNBP2NLQ9P2B4 639 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 UBA2Q9UBT2 640 aaPredicted RBP18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 DMTF1Q9Y222 760 aa18.65■□□□□ 0.58
SYNGR3-204ENST00000564642 TP53BP1Q12888 1972 aaPredicted RBP18.64■□□□□ 0.58
SYNGR3-204ENST00000564642 DOCK9Q9BZ29 2069 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 MFAP3LO75121 409 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 PCDH8O95206 1070 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 IGSF6O95976 241 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 ZNF883P0CG24 379 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 RARAP10276 462 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 GKP32189 559 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 PAPOLAP51003 745 aaKnown RBP18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 DPYSL2Q16555 572 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 HADHQ16836 314 aaKnown RBP18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 SETMARQ53H47 684 aaPredicted RBP18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 ATXN7L2Q5T6C5 722 aaPredicted RBP18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 NAPEPLDQ6IQ20 393 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 SARM1Q6SZW1 724 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 PIP4P1Q86T03 277 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 CNGA4Q8IV77 575 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 TEKT4Q8WW24 435 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 CCDC42Q96M95 316 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 GDAP1L1Q96MZ0 367 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 OSBPL1AQ9BXW6 950 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 UVRAGQ9P2Y5 699 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 NENFQ9UMX5 172 aa18.64■□□□□ 0.57
SYNGR3-204ENST00000564642 A0A1W2PQU0 124 aa18.63■□□□□ 0.57
SYNGR3-204ENST00000564642 AKR1B15C9JRZ8 316 aaPredicted RBP18.63■□□□□ 0.57
SYNGR3-204ENST00000564642 J3KR12 359 aa18.63■□□□□ 0.57
SYNGR3-204ENST00000564642 DFFAO00273 331 aa18.63■□□□□ 0.57
SYNGR3-204ENST00000564642 ADRB3P13945 408 aa18.63■□□□□ 0.57
SYNGR3-204ENST00000564642 TCF4P15884 667 aa18.63■□□□□ 0.57
SYNGR3-204ENST00000564642 HNRNPDQ14103 355 aaKnown RBP18.63■□□□□ 0.57
SYNGR3-204ENST00000564642 STAT4Q14765 748 aa18.63■□□□□ 0.57
SYNGR3-204ENST00000564642 ASTE1Q2TB18 679 aaPredicted RBP18.63■□□□□ 0.57
SYNGR3-204ENST00000564642 ZNF805Q5CZA5 627 aa18.63■□□□□ 0.57
SYNGR3-204ENST00000564642 LZTR1Q8N653 840 aa18.63■□□□□ 0.57
SYNGR3-204ENST00000564642 NETO2Q8NC67 525 aa18.63■□□□□ 0.57
SYNGR3-204ENST00000564642 CHP1Q99653 195 aa18.63■□□□□ 0.57
SYNGR3-204ENST00000564642 NHEJ1Q9H9Q4 299 aaPredicted RBP18.63■□□□□ 0.57
SYNGR3-204ENST00000564642 PCDHB9Q9Y5E1 797 aa18.63■□□□□ 0.57
SYNGR3-204ENST00000564642 PRAMEF26H0Y7S4 382 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 KCNK3O14649 394 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 WNT9AO14904 365 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 SH3BP5O60239 455 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 DFNA5O60443 496 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 PRAMEF11O60813 436 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 WNT1P04628 370 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 UGT2B4P06133 528 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 TMEM253P0C7T8 217 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 CTSKP43235 329 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 DPYSQ14117 519 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 KRT81Q14533 505 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 SUZ12Q15022 739 aaKnown RBP18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 CYTH1Q15438 398 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 ST3GAL2Q16842 350 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 GDPD4Q6W3E5 623 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 PARS2Q7L3T8 475 aaKnown RBP18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 POLNQ7Z5Q5 900 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 HORMAD1Q86X24 394 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 SETD7Q8WTS6 366 aaKnown RBP18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 KLK6Q92876 244 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 FEM1CQ96JP0 617 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 KLHL32Q96NJ5 620 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 PACSIN1Q9BY11 444 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 SP110Q9HB58 689 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 LCMT1Q9UIC8 334 aa18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 FNDC3AQ9Y2H6 1198 aaKnown RBP18.62■□□□□ 0.57
SYNGR3-204ENST00000564642 A0A1W2PR77 199 aa18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 C16orf96A6NNT2 1141 aa18.61■□□□□ 0.57
SYNGR3-204ENST00000564642 SLC31A1O15431 190 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms