RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 CDH22Q9UJ99 828 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 ARHGAP5Q13017 1502 aa4.56□□□□□ -1.68
CHD9-212ENST00000564641 PREX1Q8TCU6 1659 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 NPIPB13A6NJU9 1138 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 NPIPB5A8MRT5 1133 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 NPIPB4C9JG80 1138 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 ITM2AO43736 263 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 SKAP2O75563 359 aaPredicted RBP4.55□□□□□ -1.68
CHD9-212ENST00000564641 SERPINI2O75830 405 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 ACTL6BO94805 426 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 DDAH2O95865 285 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 TFRCP02786 760 aaKnown RBP4.55□□□□□ -1.68
CHD9-212ENST00000564641 SNRNP70P08621 437 aaKnown RBP4.55□□□□□ -1.68
CHD9-212ENST00000564641 ZNF12P17014 697 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 SERPINA4P29622 427 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 RFC1P35251 1148 aaPredicted RBP4.55□□□□□ -1.68
CHD9-212ENST00000564641 SKIV2L2P42285 1042 aaKnown RBP4.55□□□□□ -1.68
CHD9-212ENST00000564641 PDLIM4P50479 330 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 CLCN5P51795 746 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 RHBDL3P58872 404 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 EEF1A2Q05639 463 aaKnown RBP4.55□□□□□ -1.68
CHD9-212ENST00000564641 HDAC1Q13547 482 aaPredicted RBP4.55□□□□□ -1.68
CHD9-212ENST00000564641 DCTN1Q14203 1278 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 ZNF672Q499Z4 452 aaPredicted RBP4.55□□□□□ -1.68
CHD9-212ENST00000564641 MAP9Q49MG5 647 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 SYTL3Q4VX76 610 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 GORABQ5T7V8 394 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 KLHL17Q6TDP4 642 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.55□□□□□ -1.68
CHD9-212ENST00000564641 NEK10Q6ZWH5 1172 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 CCDC117Q8IWD4 279 aaPredicted RBP4.55□□□□□ -1.68
CHD9-212ENST00000564641 SCN4BQ8IWT1 228 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 SMC5Q8IY18 1101 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 SAMD3Q8N6K7 520 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 KCNJ9Q92806 393 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 SLC39A13Q96H72 371 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 SLC25A33Q9BSK2 321 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 RETREG1Q9H6L5 497 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 AGO1Q9UL18 857 aaKnown RBP4.55□□□□□ -1.68
CHD9-212ENST00000564641 TTC37Q6PGP7 1564 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 PLEKHH2Q8IVE3 1493 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 TROQ12816 1431 aaPredicted RBP4.55□□□□□ -1.68
CHD9-212ENST00000564641 YEATS2Q9ULM3 1422 aa4.55□□□□□ -1.68
CHD9-212ENST00000564641 FRMPD1Q5SYB0 1578 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 LGALS16A8MUM7 142 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 ERVV-2B6SEH9 535 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 SYT5O00445 386 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 PEX14O75381 377 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 TNFRSF6BO95407 300 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 CYP4B1P13584 511 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 THPOP40225 353 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 RGS19P49795 217 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 NEK3P51956 506 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 ZNF718Q3SXZ3 478 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 GALNTL6Q49A17 601 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 ZNF329Q86UD4 541 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 RBFAQ8N0V3 343 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 RFLNBQ8N5W9 214 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 TMED6Q8WW62 240 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 ELAC2Q9BQ52 826 aaKnown RBP4.54□□□□□ -1.68
CHD9-212ENST00000564641 OBP2BQ9NPH6 170 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 FBXO40Q9UH90 709 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 SLC45A1Q9Y2W3 748 aa4.54□□□□□ -1.68
CHD9-212ENST00000564641 REREQ9P2R6 1566 aa4.53□□□□□ -1.68
CHD9-212ENST00000564641 SEPT4O43236 478 aa4.53□□□□□ -1.68
CHD9-212ENST00000564641 C21orf33P30042 268 aaPredicted RBP4.53□□□□□ -1.68
CHD9-212ENST00000564641 GPR12P47775 334 aa4.53□□□□□ -1.68
CHD9-212ENST00000564641 ZRSR1Q15695 479 aaKnown RBP4.53□□□□□ -1.68
CHD9-212ENST00000564641 PFKFB4Q16877 469 aa4.53□□□□□ -1.68
CHD9-212ENST00000564641 EXOC8Q8IYI6 725 aa4.53□□□□□ -1.68
CHD9-212ENST00000564641 MIGA1Q8NAN2 632 aa4.53□□□□□ -1.68
CHD9-212ENST00000564641 OR1N1Q8NGS0 311 aa4.53□□□□□ -1.68
CHD9-212ENST00000564641 C2CD4CQ8TF44 421 aa4.53□□□□□ -1.68
CHD9-212ENST00000564641 PABPC3Q9H361 631 aaKnown RBP4.53□□□□□ -1.68
CHD9-212ENST00000564641 KLQ9UEF7 1012 aa4.53□□□□□ -1.68
CHD9-212ENST00000564641 ERRFI1Q9UJM3 462 aaPredicted RBP4.53□□□□□ -1.68
CHD9-212ENST00000564641 CDC23Q9UJX2 597 aa4.53□□□□□ -1.68
CHD9-212ENST00000564641 DHDHQ9UQ10 334 aa4.53□□□□□ -1.68
CHD9-212ENST00000564641 LRCH1Q9Y2L9 728 aa4.53□□□□□ -1.68
CHD9-212ENST00000564641 MLH3Q9UHC1 1453 aa4.53□□□□□ -1.68
CHD9-212ENST00000564641 AGLP35573 1532 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 ARHGEF12Q9NZN5 1544 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 IQSEC2Q5JU85 1478 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 FYCO1Q9BQS8 1478 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 A0A087WYN8 130 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 A0A096LPK6 155 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 IGLV5-52A0A0A0MRZ9 124 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 LINC01553A4QN01 128 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 GRID2O43424 1007 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 CLDN7O95471 211 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 GYS1P13807 737 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 CHN1P15882 459 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 YWHAQP27348 245 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 MCM2P49736 904 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 PEX5P50542 639 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 BIRC2Q13490 618 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 OTUD3Q5T2D3 398 aaPredicted RBP4.52□□□□□ -1.69
CHD9-212ENST00000564641 ATG9BQ674R7 924 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 RNF144BQ7Z419 303 aa4.52□□□□□ -1.69
CHD9-212ENST00000564641 SCAIQ8N9R8 606 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms