RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ADCK5Q3MIX3 580 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 C8orf82Q6P1X6 216 aaPredicted RBP5.08□□□□□ -1.6
UBR1-205ENST00000564540 C18orf65Q6ZTR6 163 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 C2CD5Q86YS7 1000 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 TMC8Q8IU68 726 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 HERC6Q8IVU3 1022 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 RBFAQ8N0V3 343 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 GHDCQ8N2G8 530 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 CLIP4Q8N3C7 705 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 LMO3Q8TAP4 145 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 FAM84BQ96KN1 310 aaPredicted RBP5.08□□□□□ -1.6
UBR1-205ENST00000564540 NPLQ9BXD5 320 aaPredicted RBP5.08□□□□□ -1.6
UBR1-205ENST00000564540 TM6SF1Q9BZW5 370 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 MVB12BQ9H7P6 319 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 IL36RNQ9UBH0 155 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 FBXO40Q9UH90 709 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 KDM4EB2RXH2 506 aaPredicted RBP5.07□□□□□ -1.6
UBR1-205ENST00000564540 ACOT8O14734 319 aa5.07□□□□□ -1.6
UBR1-205ENST00000564540 SLC25A17O43808 307 aa5.07□□□□□ -1.6
UBR1-205ENST00000564540 ADAP00813 363 aa5.07□□□□□ -1.6
UBR1-205ENST00000564540 ZNF12P17014 697 aa5.07□□□□□ -1.6
UBR1-205ENST00000564540 DCTDP32321 178 aa5.07□□□□□ -1.6
UBR1-205ENST00000564540 AMTP48728 403 aa5.07□□□□□ -1.6
UBR1-205ENST00000564540 SLC18A2Q05940 514 aa5.07□□□□□ -1.6
UBR1-205ENST00000564540 PLCB4Q15147 1175 aa5.07□□□□□ -1.6
UBR1-205ENST00000564540 ANKRD45Q5TZF3 282 aa5.07□□□□□ -1.6
UBR1-205ENST00000564540 DENND1BQ6P3S1 775 aa5.07□□□□□ -1.6
UBR1-205ENST00000564540 NKAPQ8N5F7 415 aaKnown RBP5.07□□□□□ -1.6
UBR1-205ENST00000564540 TMED6Q8WW62 240 aa5.07□□□□□ -1.6
UBR1-205ENST00000564540 LMLNQ96KR4 655 aa5.07□□□□□ -1.6
UBR1-205ENST00000564540 COG8Q96MW5 612 aa5.07□□□□□ -1.6
UBR1-205ENST00000564540 MSTO1Q9BUK6 570 aa5.07□□□□□ -1.6
UBR1-205ENST00000564540 CDT1Q9H211 546 aa5.07□□□□□ -1.6
UBR1-205ENST00000564540 TTC12Q9H892 705 aaPredicted RBP5.07□□□□□ -1.6
UBR1-205ENST00000564540 CLDN16Q9Y5I7 305 aa5.07□□□□□ -1.6
UBR1-205ENST00000564540 A0A096LPK6 155 aa5.06□□□□□ -1.6
UBR1-205ENST00000564540 KIF1CO43896 1103 aaKnown RBP5.06□□□□□ -1.6
UBR1-205ENST00000564540 SERPINC1P01008 464 aa5.06□□□□□ -1.6
UBR1-205ENST00000564540 GPR12P47775 334 aa5.06□□□□□ -1.6
UBR1-205ENST00000564540 CLCN5P51795 746 aa5.06□□□□□ -1.6
UBR1-205ENST00000564540 BNC1Q01954 994 aa5.06□□□□□ -1.6
UBR1-205ENST00000564540 CAPSQ13938 189 aa5.06□□□□□ -1.6
UBR1-205ENST00000564540 CTTNQ14247 550 aaKnown RBP5.06□□□□□ -1.6
UBR1-205ENST00000564540 PRSS57Q6UWY2 283 aa5.06□□□□□ -1.6
UBR1-205ENST00000564540 TBC1D22AQ8WUA7 517 aa5.06□□□□□ -1.6
UBR1-205ENST00000564540 STN1Q9H668 368 aaKnown RBP5.06□□□□□ -1.6
UBR1-205ENST00000564540 DOCK7Q96N67 2140 aa5.06□□□□□ -1.6
UBR1-205ENST00000564540 IGHV4-28A0A0C4DH34 117 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 LINC01553A4QN01 128 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 IRAK2O43187 625 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 ANP32CO43423 234 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 PPP1R3DO95685 299 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 FCGR1AP12314 374 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 ARSFP54793 590 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 KIF5AQ12840 1032 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 SLC18A3Q16572 532 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 IZUMO4Q1ZYL8 232 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 GRAMD1BQ3KR37 738 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 DNAAF1Q8NEP3 725 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 HSPH1Q92598 858 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 STAMQ92783 540 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 CLSTN3Q9BQT9 956 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 LMAN2LQ9H0V9 348 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 C6orf106Q9H6K1 298 aaPredicted RBP5.05□□□□□ -1.6
UBR1-205ENST00000564540 CLK4Q9HAZ1 481 aaKnown RBP5.05□□□□□ -1.6
UBR1-205ENST00000564540 RASSF1Q9NS23 344 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 OCIAD1Q9NX40 245 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 GDAQ9Y2T3 454 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 PCDHGB1Q9Y5G3 927 aa5.05□□□□□ -1.6
UBR1-205ENST00000564540 MORC2Q9Y6X9 1032 aaPredicted RBP5.05□□□□□ -1.6
UBR1-205ENST00000564540 VWA3AA6NCI4 1184 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 IFITM10A6NMD0 228 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 PEX12O00623 359 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 KLK10O43240 276 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 KCNJ13O60928 360 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 ZBTB11O95625 1053 aaPredicted RBP5.04□□□□□ -1.6
UBR1-205ENST00000564540 WEE2P0C1S8 567 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 CTPS1P17812 591 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 ART1P52961 327 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 RRP1P56182 461 aaKnown RBP5.04□□□□□ -1.6
UBR1-205ENST00000564540 ARL4CP56559 192 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 GRSF1Q12849 480 aaKnown RBP eCLIP5.04□□□□□ -1.6
UBR1-205ENST00000564540 NCAPH2Q6IBW4 605 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.04□□□□□ -1.6
UBR1-205ENST00000564540 CREB3L2Q70SY1 520 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 ARMC9Q7Z3E5 817 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 PATL1Q86TB9 770 aaKnown RBP5.04□□□□□ -1.6
UBR1-205ENST00000564540 MON1AQ86VX9 555 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 SPATA5Q8NB90 893 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 MCPH1Q8NEM0 835 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 FAM216AQ8WUB2 273 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 NOD2Q9HC29 1040 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 CNPY2Q9Y2B0 182 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 PCDHGB3Q9Y5G1 929 aa5.04□□□□□ -1.6
UBR1-205ENST00000564540 EME2A4GXA9 379 aaPredicted RBP5.03□□□□□ -1.6
UBR1-205ENST00000564540 FAM90A7PA6NKC0 464 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 FAM90A22PA8MWA6 464 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 FAM90A12PA8MX19 464 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 FAM90A23PA8MXZ1 464 aa5.03□□□□□ -1.6
UBR1-205ENST00000564540 CHL1O00533 1208 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms