RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ALG1LQ6GMV1 187 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 ATP11CQ8NB49 1132 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 KDM1BQ8NB78 822 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 BBOF1Q8ND07 529 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 ISG20Q96AZ6 181 aaKnown RBP13.11□□□□□ -0.31
SPG7-209ENST00000564047 PPP1R2P1Q96PQ5 205 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 FCRL5Q96RD9 977 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 MGME1Q9BQP7 344 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 TRIM31Q9BZY9 425 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 CIPCQ9C0C6 399 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 CEP44Q9C0F1 390 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 POLR1EQ9GZS1 481 aaKnown RBP13.11□□□□□ -0.31
SPG7-209ENST00000564047 GLOD4Q9HC38 313 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 EPB41L5Q9HCM4 733 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 NT5MQ9NPB1 228 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 GDF3Q9NR23 364 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 HEBP1Q9NRV9 189 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 RAB6BQ9NRW1 208 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 WHRNQ9P202 907 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 RSPH14Q9UHP6 348 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 DUSP12Q9UNI6 340 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 SORCS3Q9UPU3 1222 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 ERVW-1Q9UQF0 538 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 SNX24Q9Y343 169 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 PIAS3Q9Y6X2 628 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 TPRP12270 2363 aaKnown RBP13.11□□□□□ -0.31
SPG7-209ENST00000564047 CHD5Q8TDI0 1954 aa13.11□□□□□ -0.31
SPG7-209ENST00000564047 NYNRINQ9P2P1 1898 aaKnown RBP13.1□□□□□ -0.31
SPG7-209ENST00000564047 DNALI1O14645 258 aaPredicted RBP13.1□□□□□ -0.31
SPG7-209ENST00000564047 ATP9BO43861 1147 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 METTL18O95568 372 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 SRCP12931 536 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 ITIH2P19823 946 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 NFKB1P19838 968 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 CES1P23141 567 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 NNMTP40261 264 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 TNFRSF4P43489 277 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 RPL21P46778 160 aaKnown RBP13.1□□□□□ -0.31
SPG7-209ENST00000564047 RHOAP61586 193 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 NSUN2Q08J23 767 aaKnown RBP eCLIP13.1□□□□□ -0.31
SPG7-209ENST00000564047 GPS2Q13227 327 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 SEMA5AQ13591 1074 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 PRPSAP1Q14558 356 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 E2F5Q15329 346 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 PCGF5Q86SE9 256 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 IFT20Q8IY31 132 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 PGBD5Q8N414 524 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 SH2D3CQ8N5H7 860 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 TSEN2Q8NCE0 465 aaKnown RBP13.1□□□□□ -0.31
SPG7-209ENST00000564047 UCMAQ8WVF2 138 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 SNF8Q96H20 258 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 RPL10LQ96L21 214 aaKnown RBP13.1□□□□□ -0.31
SPG7-209ENST00000564047 MRGPRX3Q96LB0 322 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 SLC25A51Q9H1U9 297 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 DPH5Q9H2P9 285 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 ACBD3Q9H3P7 528 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 VIPAS39Q9H9C1 493 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 ETNK1Q9HBU6 452 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 FAM114A2Q9NRY5 505 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 LHX3Q9UBR4 397 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 TPX2Q9ULW0 747 aaKnown RBP13.1□□□□□ -0.31
SPG7-209ENST00000564047 PLA2G4CQ9UP65 541 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 FCF1Q9Y324 198 aaKnown RBP13.1□□□□□ -0.31
SPG7-209ENST00000564047 STARD13Q9Y3M8 1113 aa13.1□□□□□ -0.31
SPG7-209ENST00000564047 K7ERQ8 282 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 SMAPO00193 183 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 MUSKO15146 869 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 SMAD6O43541 496 aaKnown RBP13.09□□□□□ -0.31
SPG7-209ENST00000564047 CR2P20023 1033 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 PSMB4P28070 264 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 TNFRSF8P28908 595 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 MAGEA6P43360 314 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 CSNK1DP48730 415 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 STK19P49842 368 aaPredicted RBP13.09□□□□□ -0.31
SPG7-209ENST00000564047 ST8SIA6P61647 398 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 BASP1P80723 227 aaKnown RBP13.09□□□□□ -0.31
SPG7-209ENST00000564047 ITKQ08881 620 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 CALCOCO2Q13137 446 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 PTPRNQ16849 979 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 SLC44A4Q53GD3 710 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 RALGPS1Q5JS13 557 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 FAM182AQ5T1J6 154 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 IZUMO3Q5VZ72 239 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 C22orf39Q6P5X5 142 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 TXNDC11Q6PKC3 985 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 KLHDC8BQ8IXV7 354 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 PCDH20Q8N6Y1 951 aaKnown RBP13.09□□□□□ -0.31
SPG7-209ENST00000564047 EIF1ADQ8N9N8 165 aaKnown RBP13.09□□□□□ -0.31
SPG7-209ENST00000564047 ARRDC2Q8TBH0 407 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 CYB5D2Q8WUJ1 264 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 IMP4Q96G21 291 aaKnown RBP13.09□□□□□ -0.31
SPG7-209ENST00000564047 MYO19Q96H55 970 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 FAM129AQ9BZQ8 928 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 FBRSL1Q9HCM7 1045 aaKnown RBP13.09□□□□□ -0.31
SPG7-209ENST00000564047 EIF2B3Q9NR50 452 aaKnown RBP13.09□□□□□ -0.31
SPG7-209ENST00000564047 GRHL1Q9NZI5 618 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 SLCO3A1Q9UIG8 710 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 SLC8A2Q9UPR5 921 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 AAR2Q9Y312 384 aaKnown RBP13.09□□□□□ -0.31
SPG7-209ENST00000564047 FARP1Q9Y4F1 1045 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms