RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 GKP32189 559 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 GJC1P36383 396 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 SLC1A1P43005 524 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 RHOAP61586 193 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 IL10RBQ08334 325 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 CCDC15Q0P6D6 951 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 PUM1Q14671 1186 aaKnown RBP eCLIP20.6■□□□□ 0.89
CMTM3-206ENST00000563672 ATXN7L2Q5T6C5 722 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-206ENST00000563672 TBC1D3GQ6DHY5 549 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 TBC1D3CQ6IPX1 549 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 ERN2Q76MJ5 926 aaKnown RBP20.6■□□□□ 0.89
CMTM3-206ENST00000563672 MAP7D3Q8IWC1 876 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 TBC1D3Q8IZP1 549 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-206ENST00000563672 RYBPQ8N488 228 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-206ENST00000563672 PCDH19Q8TAB3 1148 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 SNX19Q92543 992 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 FAF2Q96CS3 445 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 PPP1R16AQ96I34 528 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 GDAP1L1Q96MZ0 367 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 ZNF670Q9BS34 389 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 ZDHHC6Q9H6R6 413 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 EBF2Q9HAK2 575 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 DYRK4Q9NR20 520 aa20.6■□□□□ 0.89
CMTM3-206ENST00000563672 PI4KAP42356 2102 aa20.59■□□□□ 0.89
CMTM3-206ENST00000563672 DCHS1Q96JQ0 3298 aa20.59■□□□□ 0.89
CMTM3-206ENST00000563672 A0A1W2PPC4 97 aa20.59■□□□□ 0.89
CMTM3-206ENST00000563672 ARHGAP33O14559 1287 aa20.59■□□□□ 0.89
CMTM3-206ENST00000563672 LATO43561 262 aa20.59■□□□□ 0.89
CMTM3-206ENST00000563672 ITGB7P26010 798 aa20.59■□□□□ 0.89
CMTM3-206ENST00000563672 ANKRD20A8PQ5CZ79 823 aa20.59■□□□□ 0.89
CMTM3-206ENST00000563672 LRRC38Q5VT99 294 aa20.59■□□□□ 0.89
CMTM3-206ENST00000563672 RAD9BQ6WBX8 426 aa20.59■□□□□ 0.89
CMTM3-206ENST00000563672 RTKNQ9BST9 563 aa20.59■□□□□ 0.89
CMTM3-206ENST00000563672 PREBQ9HCU5 417 aa20.59■□□□□ 0.89
CMTM3-206ENST00000563672 LUC7LQ9NQ29 371 aaKnown RBP20.59■□□□□ 0.89
CMTM3-206ENST00000563672 FSCN3Q9NQT6 498 aa20.59■□□□□ 0.89
CMTM3-206ENST00000563672 KLHL11Q9NVR0 708 aa20.59■□□□□ 0.89
CMTM3-206ENST00000563672 TFR2Q9UP52 801 aa20.59■□□□□ 0.89
CMTM3-206ENST00000563672 DNAH14Q0VDD8 3507 aa20.59■□□□□ 0.89
CMTM3-206ENST00000563672 CACNA1EQ15878 2313 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 A0A0A6YYK5 440 aaPredicted RBP20.58■□□□□ 0.89
CMTM3-206ENST00000563672 KRIT1O00522 736 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 IGSF6O95976 241 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 KDELR1P24390 212 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 SERPINB6P35237 376 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 NEK3P51956 506 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 PPP2CBP62714 309 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 PPP2CAP67775 309 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 RFTN1Q14699 578 aaPredicted RBP20.58■□□□□ 0.89
CMTM3-206ENST00000563672 ZNF805Q5CZA5 627 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 TMEM139Q8IV31 216 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 SPC24Q8NBT2 197 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 RAPGEF5Q92565 580 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 ZNF599Q96NL3 588 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 BAG1Q99933 345 aaPredicted RBP20.58■□□□□ 0.89
CMTM3-206ENST00000563672 CALN1Q9BXU9 219 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 OSBPL1AQ9BXW6 950 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 SP110Q9HB58 689 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 TM9SF3Q9HD45 589 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 TMEM9BQ9NQ34 198 aa20.58■□□□□ 0.89
CMTM3-206ENST00000563672 REXO2Q9Y3B8 237 aaKnown RBP20.58■□□□□ 0.89
CMTM3-206ENST00000563672 C4orf47A7E2U8 309 aa20.57■□□□□ 0.88
CMTM3-206ENST00000563672 TM4SF5O14894 197 aa20.57■□□□□ 0.88
CMTM3-206ENST00000563672 MAFKO60675 156 aa20.57■□□□□ 0.88
CMTM3-206ENST00000563672 PALMO75781 387 aa20.57■□□□□ 0.88
CMTM3-206ENST00000563672 PEX11BO96011 259 aa20.57■□□□□ 0.88
CMTM3-206ENST00000563672 NOP2P46087 812 aaKnown RBP20.57■□□□□ 0.88
CMTM3-206ENST00000563672 RAD51Q06609 339 aa20.57■□□□□ 0.88
CMTM3-206ENST00000563672 PAFAH1B3Q15102 231 aaKnown RBP20.57■□□□□ 0.88
CMTM3-206ENST00000563672 NEK5Q6P3R8 708 aa20.57■□□□□ 0.88
CMTM3-206ENST00000563672 PARS2Q7L3T8 475 aaKnown RBP20.57■□□□□ 0.88
CMTM3-206ENST00000563672 TRIM69Q86WT6 500 aa20.57■□□□□ 0.88
CMTM3-206ENST00000563672 CPEB1Q9BZB8 566 aaKnown RBP20.57■□□□□ 0.88
CMTM3-206ENST00000563672 RCCD1A6NED2 376 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 C16orf96A6NNT2 1141 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 ZNF487B1APH4 448 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 INSIG1O15503 277 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 BUB1BO60566 1050 aaPredicted RBP20.56■□□□□ 0.88
CMTM3-206ENST00000563672 UGT2B4P06133 528 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 SYPP08247 313 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 ADRB3P13945 408 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 COMTP21964 271 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 CSNK1DP48730 415 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 AFF3P51826 1226 aaKnown RBP20.56■□□□□ 0.88
CMTM3-206ENST00000563672 RACK1P63244 317 aaKnown RBP20.56■□□□□ 0.88
CMTM3-206ENST00000563672 BNC1Q01954 994 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 NCBP2-AS2Q69YL0 99 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 FBXL19Q6PCT2 694 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 GDPD4Q6W3E5 623 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 VSIG1Q86XK7 387 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 LRRC49Q8IUZ0 686 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 PQLC3Q8N755 202 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 TSEN2Q8NCE0 465 aaKnown RBP20.56■□□□□ 0.88
CMTM3-206ENST00000563672 EXOC2Q96KP1 924 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 KLHL32Q96NJ5 620 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 ZDHHC5Q9C0B5 715 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 HYOU1Q9Y4L1 999 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 ALG6Q9Y672 507 aa20.56■□□□□ 0.88
CMTM3-206ENST00000563672 PCDH15Q96QU1 1955 aa20.55■□□□□ 0.88
CMTM3-206ENST00000563672 C3orf70A6NLC5 250 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms