RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 PSMB7Q99436 277 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 CMKLR1Q99788 373 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 ZSWIM1Q9BR11 485 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 DNAI2Q9GZS0 605 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 SEMA6CQ9H3T2 930 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 GULP1Q9UBP9 304 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 IPO11Q9UI26 975 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 APPL1Q9UKG1 709 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 DAAM1Q9Y4D1 1078 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 RNF215Q9Y6U7 377 aa7.88□□□□□ -1.15
HERPUD1-206ENST00000563343 VPS37CA5D8V6 355 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 IGLON5A6NGN9 336 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 ZNF891A8MT65 544 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 F5H5T6 163 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 PDXKO00764 312 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 SPTLC2O15270 562 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 NKX2-8O15522 239 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 DUX1O43812 170 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 ZNF821O75541 412 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 LEFTY1O75610 366 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 CLDN1O95832 211 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 PRNPP04156 253 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 ADRB3P13945 408 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 UGT1A3P35503 534 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 ABL2P42684 1182 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 RECQLP46063 649 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 RPL34P49207 117 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 NEK3P51956 506 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 PITX1P78337 314 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 CENPCQ03188 943 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 ENPEPQ07075 957 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 CCDC15Q0P6D6 951 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 KLRB1Q12918 225 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 CUL4BQ13620 913 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 LACTB2Q53H82 288 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 ZC3H12AQ5D1E8 599 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 EFHC2Q5JST6 749 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 TTC39BQ5VTQ0 682 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 CEP135Q66GS9 1140 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 FBXL22Q6P050 247 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 LVRNQ6Q4G3 990 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 LCLAT1Q6UWP7 414 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 MACC1Q6ZN28 852 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 NYAP1Q6ZVC0 841 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 PARS2Q7L3T8 475 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 CCNJLQ8IV13 435 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 GPBAR1Q8TDU6 330 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 TFAP2BQ92481 460 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 ZDHHC16Q969W1 377 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 CENPTQ96BT3 561 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 FEM1CQ96JP0 617 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 SLC45A3Q96JT2 553 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 BTN2A3PQ96KV6 586 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 KRTAP3-3Q9BYR6 98 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 KRTAP3-2Q9BYR7 98 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 TMEM8AQ9HCN3 771 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 DYRK4Q9NR20 520 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 CUEDC1Q9NWM3 386 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 SIRPGQ9P1W8 387 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 HESX1Q9UBX0 185 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 GGT7Q9UJ14 662 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 SMC3Q9UQE7 1217 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 TP53TG5Q9Y2B4 290 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 PCDHGA3Q9Y5H0 932 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 PCDHGA10Q9Y5H3 936 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 CSMD2Q7Z408 3487 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 HIVEP1P15822 2718 aa7.87□□□□□ -1.15
HERPUD1-206ENST00000563343 WIPF3A6NGB9 483 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 KCNU1A8MYU2 1149 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 SNAP91O60641 907 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 APOEP02649 317 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 VDRP11473 427 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 FGF3P11487 239 aaPredicted RBP7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 PNLIPP16233 465 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 GLB1P16278 677 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 RRM1P23921 792 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 OAS2P29728 719 aaKnown RBP7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 L1CAMP32004 1257 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 ATP1A2P50993 1020 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 YPEL5P62699 121 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 CDC20Q12834 499 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 PTK2BQ14289 1009 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 NFIL3Q16649 462 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 C5orf22Q49AR2 442 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 C1QL3Q5VWW1 255 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 OGFOD3Q6PK18 319 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 SHC4Q6S5L8 630 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 DPY19L3Q6ZPD9 716 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 INTS8Q75QN2 995 aaKnown RBP7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 BEND5Q7L4P6 421 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 SPRED1Q7Z699 444 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 ZSCAN30Q86W11 494 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 SFTPA2Q8IWL1 248 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 GALNT11Q8NCW6 608 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 OR6C4Q8NGE1 309 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 GRIN3AQ8TCU5 1115 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 EDEM3Q9BZQ6 932 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 SLC13A1Q9BZW2 595 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 SPRY4Q9C004 299 aa7.86□□□□□ -1.15
HERPUD1-206ENST00000563343 MMRN2Q9H8L6 949 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms