RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 FAM95CA0A1B0GW59 222 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 CAPN8A6NHC0 703 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 H0YJX3 145 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 HAS3O00219 553 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 PDHXO00330 501 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 TRIM38O00635 465 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 PHGDHO43175 533 aaKnown RBP13.25□□□□□ -0.29
USB1-207ENST00000563149 DYNC1LI2O43237 492 aaPredicted RBP13.25□□□□□ -0.29
USB1-207ENST00000563149 DNAJA2O60884 412 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 XRCC1P18887 633 aaPredicted RBP13.25□□□□□ -0.29
USB1-207ENST00000563149 GABRB3P28472 473 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 LSAMPQ13449 338 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 CNGA3Q16281 694 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 PPM1LQ5SGD2 360 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 NXNQ6DKJ4 435 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 FBXL19Q6PCT2 694 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 BHLHA9Q7RTU4 235 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 ARPINQ7Z6K5 226 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 SLC41A1Q8IVJ1 513 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 AHI1Q8N157 1196 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 KDM1BQ8NB78 822 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 SLC10A4Q96EP9 437 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 DTNBP1Q96EV8 351 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 PCED1BQ96HM7 432 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 ZFRQ96KR1 1074 aaKnown RBP13.25□□□□□ -0.29
USB1-207ENST00000563149 CATSPER2Q96P56 530 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 GCNAQ96QF7 691 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
USB1-207ENST00000563149 GLOD4Q9HC38 313 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 XPR1Q9UBH6 696 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 TCAF1Q9Y4C2 921 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 AMHP03971 560 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 ENO3P13929 434 aaPredicted RBP13.25□□□□□ -0.29
USB1-207ENST00000563149 ATP5F1P24539 256 aaPredicted RBP13.25□□□□□ -0.29
USB1-207ENST00000563149 PCSK1P29120 753 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 GRIA2P42262 883 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 RPL5P46777 297 aaKnown RBP13.25□□□□□ -0.29
USB1-207ENST00000563149 ARCN1P48444 511 aaKnown RBP13.25□□□□□ -0.29
USB1-207ENST00000563149 PSEN2P49810 448 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 POU4F1Q01851 419 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 STX5Q13190 355 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 CEACAM7Q14002 265 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 PSMD5Q16401 504 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 KIAA0930Q6ICG6 404 aaPredicted RBP13.25□□□□□ -0.29
USB1-207ENST00000563149 KIAA0408Q6ZU52 694 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 GPRIN1Q7Z2K8 1008 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 C2CD4AQ8NCU7 369 aaPredicted RBP13.25□□□□□ -0.29
USB1-207ENST00000563149 NLGN2Q8NFZ4 835 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 NXNL1Q96CM4 212 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 DGCR14Q96DF8 476 aaKnown RBP13.25□□□□□ -0.29
USB1-207ENST00000563149 MRPS26Q9BYN8 205 aaKnown RBP13.25□□□□□ -0.29
USB1-207ENST00000563149 PRKD2Q9BZL6 878 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 UBP1Q9NZI7 540 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 EPS15L1Q9UBC2 864 aa13.25□□□□□ -0.29
USB1-207ENST00000563149 MAGED2Q9UNF1 606 aaPredicted RBP13.25□□□□□ -0.29
USB1-207ENST00000563149 COPG1Q9Y678 874 aaKnown RBP13.25□□□□□ -0.29
USB1-207ENST00000563149 MYBPHLA2RUH7 354 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 GOLGA8TH3BQL2 631 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 SDHDO14521 159 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 ACOT8O14734 319 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 MATN3O15232 486 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 FGF10O15520 208 aaPredicted RBP13.24□□□□□ -0.29
USB1-207ENST00000563149 TNFAIP8O95379 198 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 PGK1P00558 417 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 SAT1P21673 171 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 HOXC13P31276 330 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 RGS2P41220 211 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 GLRBP48167 497 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 CD151P48509 253 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 MRPS22P82650 360 aaKnown RBP13.24□□□□□ -0.29
USB1-207ENST00000563149 CREB5Q02930 508 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 GALNT1Q10472 559 aaPredicted RBP13.24□□□□□ -0.29
USB1-207ENST00000563149 ILF2Q12905 390 aaKnown RBP13.24□□□□□ -0.29
USB1-207ENST00000563149 TLR1Q15399 786 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 ADRM1Q16186 407 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 BRMS1LQ5PSV4 323 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 TWF2Q6IBS0 349 aaKnown RBP13.24□□□□□ -0.29
USB1-207ENST00000563149 DENND5AQ6IQ26 1287 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 TIGD7Q6NT04 549 aaPredicted RBP13.24□□□□□ -0.29
USB1-207ENST00000563149 CHSY3Q70JA7 882 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 OTOP3Q7RTS5 596 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 PLEKHH3Q7Z736 793 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 LRRC49Q8IUZ0 686 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 DDI1Q8WTU0 396 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 MRPL1Q9BYD6 325 aaKnown RBP13.24□□□□□ -0.29
USB1-207ENST00000563149 CATSPERBQ9H7T0 1116 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 ZNF696Q9H7X3 374 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 EML4Q9HC35 981 aaKnown RBP13.24□□□□□ -0.29
USB1-207ENST00000563149 ARHGEF38Q9NXL2 777 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 CLIC5Q9NZA1 410 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 PADI4Q9UM07 663 aa13.24□□□□□ -0.29
USB1-207ENST00000563149 GNEQ9Y223 722 aaKnown RBP13.24□□□□□ -0.29
USB1-207ENST00000563149 TCAF2A6NFQ2 919 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 CFLARO15519 480 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 VAPBO95292 243 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 CRTAMO95727 393 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 F7P08709 466 aaPredicted RBP13.23□□□□□ -0.29
USB1-207ENST00000563149 SMIM18P0DKX4 95 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 PMLP29590 882 aa13.23□□□□□ -0.29
USB1-207ENST00000563149 ADRA1AP35348 466 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms