RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 ITKQ08881 620 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 NSUN2Q08J23 767 aaKnown RBP eCLIP9.65□□□□□ -0.86
CDH13-205ENST00000562307 SLC12A1Q13621 1099 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 KCNC3Q14003 757 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 ZNF235Q14590 738 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 TEAD2Q15562 447 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 SLC1A5Q15758 541 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 DUSP6Q16828 381 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 SLC5A9Q2M3M2 681 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 ADGRD2Q7Z7M1 963 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 CTAGE3PQ8IX95 158 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 UNC5BQ8IZJ1 945 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 TNS4Q8IZW8 715 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 BANPQ8N9N5 519 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.65□□□□□ -0.86
CDH13-205ENST00000562307 FIBINQ8TAL6 211 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 USP13Q92995 863 aaPredicted RBP9.65□□□□□ -0.86
CDH13-205ENST00000562307 MRRFQ96E11 262 aaKnown RBP9.65□□□□□ -0.86
CDH13-205ENST00000562307 SGSM3Q96HU1 749 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 FEM1CQ96JP0 617 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 LMLNQ96KR4 655 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 SMC6Q96SB8 1091 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 SEMA3CQ99985 751 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 GDF15Q99988 308 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 FSD1LQ9BXM9 530 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 PBX4Q9BYU1 374 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 MUC3BQ9H195 1237 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 EPN3Q9H201 632 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 CHRAC1Q9NRG0 131 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 TDP1Q9NUW8 608 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 INTS9Q9NV88 658 aaKnown RBP9.65□□□□□ -0.86
CDH13-205ENST00000562307 TCAF1Q9Y4C2 921 aa9.65□□□□□ -0.86
CDH13-205ENST00000562307 MYO18AQ92614 2054 aaKnown RBP9.64□□□□□ -0.87
CDH13-205ENST00000562307 HMX2A2RU54 273 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 GMNCA6NCL1 334 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 UGT1A9O60656 530 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 SIN3BO75182 1162 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 RFPL1O75677 317 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 PAPSS2O95340 614 aaPredicted RBP9.64□□□□□ -0.87
CDH13-205ENST00000562307 MT-ND3P03897 115 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 SERPINF2P08697 491 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 ATXN1LP0C7T5 689 aaKnown RBP9.64□□□□□ -0.87
CDH13-205ENST00000562307 KRT4P19013 534 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 HLA-DPA1P20036 260 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 GLDCP23378 1020 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 NMBRP28336 390 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 PBX2P40425 430 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 CCNFP41002 786 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 CSKP41240 450 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 SERPINH1P50454 418 aaKnown RBP9.64□□□□□ -0.87
CDH13-205ENST00000562307 NTHL1P78549 312 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 ARF5P84085 180 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 CDK18Q07002 472 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 SLC20A2Q08357 652 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 USP4Q13107 963 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 RAB30Q15771 203 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 ZNF77Q15935 545 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 RALGPS1Q5JS13 557 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 TEDDM1Q5T9Z0 273 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 GRTP1Q5TC63 336 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 TTC19Q6DKK2 380 aaPredicted RBP9.64□□□□□ -0.87
CDH13-205ENST00000562307 CES3Q6UWW8 571 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 PACS1Q6VY07 963 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 LEKR1Q6ZMV7 388 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 GRASPQ7Z6J2 395 aaPredicted RBP9.64□□□□□ -0.87
CDH13-205ENST00000562307 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.64□□□□□ -0.87
CDH13-205ENST00000562307 DCAF4L2Q8NA75 395 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 PPHLN1Q8NEY8 458 aaKnown RBP9.64□□□□□ -0.87
CDH13-205ENST00000562307 WFDC5Q8TCV5 224 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 DDI1Q8WTU0 396 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 ACDQ96AP0 544 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 ZNF669Q96BR6 464 aaPredicted RBP9.64□□□□□ -0.87
CDH13-205ENST00000562307 OTUB2Q96DC9 234 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 MFSD3Q96ES6 412 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 SERAC1Q96JX3 654 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 NUDCD1Q96RS6 583 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 TRIB3Q96RU7 358 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 CDCA3Q99618 268 aaPredicted RBP9.64□□□□□ -0.87
CDH13-205ENST00000562307 CPNE1Q99829 537 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 MCMBPQ9BTE3 642 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 CINPQ9BW66 212 aaPredicted RBP9.64□□□□□ -0.87
CDH13-205ENST00000562307 TLE6Q9H808 572 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 KIF9Q9HAQ2 790 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 UGT1A7Q9HAW7 530 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 UGT1A10Q9HAW8 530 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 UGT1A8Q9HAW9 530 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 NOD2Q9HC29 1040 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 KCNK9Q9NPC2 374 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 TREX1Q9NSU2 369 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 MKS1Q9NXB0 559 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 NSMCE4AQ9NXX6 385 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 KIAA1522Q9P206 1035 aaPredicted RBP9.64□□□□□ -0.87
CDH13-205ENST00000562307 TBC1D14Q9P2M4 693 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 RIMKLBQ9ULI2 386 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 CCL26Q9Y258 94 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 ARIH1Q9Y4X5 557 aaPredicted RBP9.64□□□□□ -0.87
CDH13-205ENST00000562307 SHROOM3Q8TF72 1996 aa9.64□□□□□ -0.87
CDH13-205ENST00000562307 HEATR9A2RTY3 570 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 MROH6A6NGR9 719 aa9.63□□□□□ -0.87
CDH13-205ENST00000562307 TRIM49D1C9J1S8 452 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms